Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00614
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 611 CIAY*LVKRLCYLNNFNVRSF 673
           C+    +K++C LNN + ++F
Sbjct: 196 CVVNQYIKQVCKLNNGHYKNF 216


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 611 CIAY*LVKRLCYLNNFNVRSF 673
           C+    +K++C LNN + ++F
Sbjct: 21  CVVNQYIKQVCKLNNGHYKNF 41


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 726 FLVYTLYIIYSFY 688
           FL+YT+  IYS Y
Sbjct: 40  FLIYTITEIYSVY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,400
Number of Sequences: 336
Number of extensions: 3157
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)