Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00608
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 116 2e-27
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 64 2e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 51 1e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 4e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.001
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.002
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.028
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.11
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 30 0.34
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.60
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 29 0.80
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 1.4
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 2.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 3.2
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.2
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 5.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 5.6
SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation protein... 25 9.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 116 bits (280), Expect = 2e-27
Identities = 69/132 (52%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 35 GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94
Query: 434 FANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRILALLRW*SG--LRWCRRSHLSVLRV- 604
ANV+RYFPTQALNFAFKDK+K++F R +W +G S+L V
Sbjct: 95 TANVLRYFPTQALNFAFKDKFKKMFGYKKERD---GYAKWFAGNLASGGAAGAASLLFVY 151
Query: 605 PLDFARTRLAAD 640
LD+ARTRLA D
Sbjct: 152 SLDYARTRLAND 163
Score = 34.3 bits (75), Expect = 0.016
Identities = 30/131 (22%), Positives = 50/131 (38%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V ++ + L S + ++++ G+VD + + + GL +RG
Sbjct: 140 GAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFG 199
Query: 437 ANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRILALLRW*SGLRWCRRSHLSVLRVPLDF 616
+V+ + L F D K V LA L W + V PLD
Sbjct: 200 PSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFL----LGWAVTTGSGVASYPLDT 255
Query: 617 ARTRLAADVGK 649
R R+ G+
Sbjct: 256 IRRRMMMTSGE 266
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 63.7 bits (148), Expect = 2e-11
Identities = 43/128 (33%), Positives = 68/128 (53%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 28 GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 437 ANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRILALLRW*SGLRWCRRSHLSVLRVPLDF 616
N +R FP A+ FA + KQ + + + R G S + PLD
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLENHERLLFGAIAGAASCATTY--PLDI 138
Query: 617 ARTRLAAD 640
ARTRL+ +
Sbjct: 139 ARTRLSIE 146
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + + +T P + ++ QV + YK I A I K +G+ F+RG
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290
Query: 437 ANVIRYFPTQALNF 478
+N+++ P ++ +
Sbjct: 291 SNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 51.2 bits (117), Expect = 1e-07
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = +2
Query: 233 VR*GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 412
V+ G+ G G + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 413 LSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
++G+ A + R FP + F ++ ++V
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
+S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 440 NVIRYFPTQALNFAFKDKYKQ 502
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 31.9 bits (69), Expect = 0.085
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 433
G++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 434 FANVIRYFPTQALNFAFKDKYKQVFSAVLTRR 529
++ FP A + + K+ + +L R
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270
Query: 437 ANVIRYFPTQALNFAFKDKYKQVFSAV 517
++ P A+++A + K++ V
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEILIRV 297
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 284 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 454
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 455 FPTQALNFAFKDKYKQVFSAVLTRR 529
P +AL FA D Y +++ V R+
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRK 100
Score = 33.1 bits (72), Expect = 0.037
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 GISAAVSKT-AVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
G A ++T V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 431 NFANVIRYFPTQALNFAFKDKYKQVFSAVLTR 526
A + R+ A F K + + +R
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.5 bits (73), Expect = 0.028
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +2
Query: 245 LPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 424
L G GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 425 RGNFANVIRYFPTQALNF 478
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
Score = 25.0 bits (52), Expect = 9.8
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVS----KQIAADQR-----YKGIVDAFV---RIPK 400
G++ + A AP++ VK LQ KQ A + Y+ +D + +
Sbjct: 56 GVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVKV 115
Query: 401 EQGLLSFWRGNFANVIRYFPTQALNF 478
+G + +RG N+I P +++NF
Sbjct: 116 HEGTRALFRGLGPNLIGTIPARSINF 141
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.5 bits (68), Expect = 0.11
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
++ ++ PI+ VK +Q ++A + YK + +I + GLL FW G
Sbjct: 212 VAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265
Query: 440 NVIRYFPTQALNFAFKDKYKQV 505
+ R + + F +K ++
Sbjct: 266 RLARLILSGGIVFTVYEKVMEI 287
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.9 bits (64), Expect = 0.34
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GIS+ + + +AP + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 24 GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72
Query: 437 ANVIRYFPTQALNFAFKDKYKQV 505
+ Y A F K K +
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKHL 95
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
I+ A SK + P++ V LQ YK D F+ I + G+ +RG
Sbjct: 201 IAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252
Query: 440 NVIRYFP 460
++++ P
Sbjct: 253 SMLKVAP 259
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.60
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 427
G + S VAP++ VK Q Q + G + + I +G+ +R
Sbjct: 13 GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72
Query: 428 GNFANVIRYFPTQALNFAFKDKYKQVF 508
G ++ Y P+ ++ F +K K +F
Sbjct: 73 GVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 28.7 bits (61), Expect = 0.80
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 347 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 445
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 0.80
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -1
Query: 654 ISLPTSAARRVRAKSRGTRSTERWLRRHHRRPDYQRSNARMRLLVNTAENTCLYLSLKAK 475
IS PTS VRAK+R R+ + LR + R+ + EN+ +S K
Sbjct: 85 ISNPTSKTNNVRAKARNIRNPSQRLRPSTSLARLSNNAPRIPKEASLHENS---ISSKES 141
Query: 474 LSAWVGKYLMTLAK 433
S K++ T+ K
Sbjct: 142 PSVTTSKHVATITK 155
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 CGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
CG++A V + V P+E +K Q+ +++ + + +GL F+RG
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKGS----------VINTISTLARSEGLKGFYRG 138
Query: 431 NFANVIRYFPT 463
+ V Y PT
Sbjct: 139 YWMGVAIYLPT 149
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
IS + V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 121 ISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 3.2
Identities = 21/93 (22%), Positives = 38/93 (40%)
Frame = +2
Query: 242 GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 421
GL CG + +A+ P++ +K QV Y G + F I ++GL
Sbjct: 30 GLLACG----TTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGL 77
Query: 422 WRGNFANVIRYFPTQALNFAFKDKYKQVFSAVL 520
+ G +I Y + F + +K +S ++
Sbjct: 78 YTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLV 110
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 83 YEITPNLLFKNQELVFRDPPSACAATPTSTY 175
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 576 RHHRRPDYQRSNARMRLLVNTAENTCL 496
R+H P +RSN R+ V + +NT L
Sbjct: 847 RNHSNPSVRRSNLRVGKTVESVQNTKL 873
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 387 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 280
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 25.0 bits (52), Expect = 9.8
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 164 TSTYSPSEDHIIEQNVEPRR-----SGRVR*GLPGCGISAAVSKTAVA-PIERVKLLLQV 325
+STY H+ ++P + + L CG S + SKTA + +E +K LQ
Sbjct: 105 SSTYRDIVSHVTAMCMDPNSKRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIK-KLQE 163
Query: 326 QHVSKQIAADQRYKGIVD 379
++ + A R + +VD
Sbjct: 164 KNEIPIVRARMRIRIVVD 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,495,112
Number of Sequences: 5004
Number of extensions: 47010
Number of successful extensions: 158
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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