Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00607
(606 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 76 8e-13
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 60 5e-08
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 55 1e-06
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 54 3e-06
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 47 3e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 43 0.006
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 42 0.009
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 42 0.009
UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep: OR... 40 0.060
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 38 0.18
UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.24
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo... 36 0.56
UniRef50_A4QMB1 Cluster: ORF58e; n=7; cellular organisms|Rep: OR... 36 0.98
UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q4SFI1 Cluster: Chromosome 7 SCAF14601, whole genome sh... 33 4.0
UniRef50_A5ATL8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_UPI0000D57048 Cluster: PREDICTED: similar to CG17111-PA... 33 5.2
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 75.8 bits (178), Expect = 8e-13
Identities = 41/64 (64%), Positives = 42/64 (65%)
Frame = +3
Query: 63 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKILDSGGSMVAKLKLK 242
F RTKVRGSK IRYRPSSN K + M A GKPK L SGGSMVAKLKLK
Sbjct: 6 FRCQRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFLGSGGSMVAKLKLK 65
Query: 243 GIDG 254
GIDG
Sbjct: 66 GIDG 69
Score = 34.3 bits (75), Expect = 2.3
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2
Query: 134 CHLAIRRRYYNGSAGSFRETKDFGLRGEYGCKAET*RN*RRAPPGVEPAA 283
C L IR Y+ S + + K G G K + RAPPGVEPAA
Sbjct: 30 CRLGIRECYWMTSLAPYGKPKFLGSGGSMVAKLKLKGIDGRAPPGVEPAA 79
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 59.7 bits (138), Expect = 5e-08
Identities = 43/99 (43%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -3
Query: 604 VARVRPRTSKGITDXXXXXXXXL-EDAGPLRRI*YVVSELXXXXXXXXXXXXXXXXXXXX 428
VARVRPRTSKGITD + PLRR+ V
Sbjct: 33 VARVRPRTSKGITDLLLPQTSIGLKPIVPLRRVNRQVPATLFSRLRSRSLSQL------- 85
Query: 427 XXXXLTRQIAPPTKNVHAPPPTESRKSC*SVNPSGVRAW 311
+RQI PPTKN HAPPPT+SRKS SVNP V W
Sbjct: 86 -----SRQITPPTKNGHAPPPTKSRKSSQSVNPYCVWTW 119
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 55.2 bits (127), Expect = 1e-06
Identities = 36/68 (52%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 63 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKP----KILDSGGSMVAK 230
FH RTKV GSK IRY PS N K R G P K L SGGSMVA+
Sbjct: 6 FHCQRTKVGGSKMIRYHPSLNHK-----------RCRLGIGGSPYEKSKFLGSGGSMVAR 54
Query: 231 LKLKGIDG 254
LKLKGIDG
Sbjct: 55 LKLKGIDG 62
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 363 VGGGAWTFLVGGAICLVNSGNERDSSLL 446
+GGGAW FLVGGAICLVNS NERD SLL
Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 378 MHHHPPNQERAVNLSILPVSGPG 310
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 378 MHHHPPNQERAVNLSILPVSGPG 310
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 42.7 bits (96), Expect = 0.006
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -1
Query: 399 LHQLRTSMHHHPPNQERAVNL 337
+H+L+T+MHHHP NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
Score = 37.1 bits (82), Expect = 0.32
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 437 RVSFVTGINQTNRSTN*ERPCTTTHRIKKELLICQSFRCPGLVIFPVLSQIKPQAPLLVV 258
++SFV GINQTN H +K + + + +FPVLSQIKPQAP L
Sbjct: 164 KISFVIGINQTNH----------IHELKTAMHHHPRNQERAINLFPVLSQIKPQAPRLNP 213
Query: 257 PSVNSFK 237
++ S K
Sbjct: 214 KTLISHK 220
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 176 GSFRETKDFGLRGEYGCKAET 238
GS RETK FG RGEYGCKAET
Sbjct: 16 GSVRETKVFGFRGEYGCKAET 36
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 42.3 bits (95), Expect = 0.009
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +3
Query: 147 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDG 254
SADV A K K L SGGSMVA+LKLKGIDG
Sbjct: 21 SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDG 56
>UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep:
ORF64d - Pinus koraiensis (Korean pine)
Length = 64
Score = 39.5 bits (88), Expect = 0.060
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2
Query: 323 CPGLVIFPVLSQIKPQAPLLVVPSVNSFKFQLCNHTP 213
C LV F L +I+P AP LV VNSF+F C TP
Sbjct: 21 CQALVRFFALHRIEPHAPPLVRAPVNSFEFHSCERTP 57
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 391 LVERFVWLIPVTNETLAC 444
LVE FVWLIP+TNETL C
Sbjct: 2 LVEGFVWLIPITNETLTC 19
>UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 76
Score = 37.5 bits (83), Expect = 0.24
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2
Query: 323 CPGLVIFPVLSQIKPQAPLLVVPSVNSFKFQLCNHTP 213
C V F L +IKP AP LV VNSF+F C TP
Sbjct: 21 CQDQVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTP 57
>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
Transposase - Zea mays (Maize)
Length = 738
Score = 36.3 bits (80), Expect = 0.56
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 250 SIPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 146
+IPL +SFA IL P +K+ GF RR + +TS D
Sbjct: 505 NIPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539
>UniRef50_A4QMB1 Cluster: ORF58e; n=7; cellular organisms|Rep:
ORF58e - Pinus koraiensis (Korean pine)
Length = 58
Score = 35.5 bits (78), Expect = 0.98
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 231 LKLKGIDGGHHQEWSLRLNLTQHGKYHQART 323
+KLKGIDGG H+ WS+ N Q + +Q T
Sbjct: 1 MKLKGIDGGPHKRWSMWFNSMQSEEPYQGLT 31
>UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 289
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 LDSVGGGAWTFL--VGGAICLVNSGNERDSSLLNRRRYLGVRGLVSRNSLT 500
+D VGGG+W + G +ICL+N ++ + R L V+ L+S SLT
Sbjct: 45 VDPVGGGSWIAMNQAGLSICLLNYYQQKPPEKILISRGLLVKSLISNTSLT 95
>UniRef50_Q4SFI1 Cluster: Chromosome 7 SCAF14601, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF14601, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1418
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 260 VPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGGS 144
VPS N + + P + PG CP HC N+ G+
Sbjct: 637 VPSCNPYNKPILTFFSPDINECLKPGMCPNGHCENLPGT 675
>UniRef50_A5ATL8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 124
Score = 33.5 bits (73), Expect = 4.0
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 231 LKLKGIDGGHHQEWSLRLN 287
+KLKGIDGG H++WS+ N
Sbjct: 1 MKLKGIDGGPHKQWSMWFN 19
>UniRef50_UPI0000D57048 Cluster: PREDICTED: similar to CG17111-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG17111-PA - Tribolium castaneum
Length = 697
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -2
Query: 368 THRIKKELLICQSFRCP-GLVIFPVLSQIKPQAPLLVVPSVNSFKFQLCNHTPPGVQNLW 192
T + +++ CP + IFP L+++ + ++ +FKF V +
Sbjct: 474 TEHNDESIILLDDRGCPTNINIFPALTKVATNDSIKLIAKFQAFKFSSSPIVRFSVIVQF 533
Query: 191 FPGSCPPSHCSN 156
P SCPP C N
Sbjct: 534 CPESCPPVDCGN 545
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,338,959
Number of Sequences: 1657284
Number of extensions: 13665039
Number of successful extensions: 34545
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34525
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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