Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00607
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.         33   0.78 
AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AY128689-1|AAM97540.1| 1192|Homo sapiens PI 3-kinase enhancer lo...    30   5.5  
U93240-1|AAC25605.1|  521|Homo sapiens importin alpha 3 protein.       30   7.3  
BC034493-1|AAH34493.1|  521|Homo sapiens karyopherin alpha 4 (im...    30   7.3  
BC028691-1|AAH28691.1|  521|Homo sapiens karyopherin alpha 4 (im...    30   7.3  
BC002767-1|AAH02767.1|  690|Homo sapiens LATS1 protein protein.        30   7.3  
AF164041-1|AAD50272.1| 1130|Homo sapiens WARTS protein kinase pr...    30   7.3  
AF104413-1|AAD16882.1| 1130|Homo sapiens large tumor suppressor ...    30   7.3  
AB209426-1|BAD92663.1|  830|Homo sapiens LATS homolog 1 variant ...    30   7.3  
AB002533-1|BAA19546.1|  521|Homo sapiens Qip1 protein.                 30   7.3  

>BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.
          Length = 535

 Score = 33.1 bits (72), Expect = 0.78
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 183 SGKPKILDSGGSMVAKLKLKGIDGGHHQEWSLRLNLTQHGKYH 311
           S +P++L SGGS  +   + GI G HH    + + L + G +H
Sbjct: 391 SRRPRLLGSGGSPASASLVAGITGAHHHAQLIFVFLVEMGFHH 433


>AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43200 fis, clone FEBRA2007793. ).
          Length = 188

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = +1

Query: 148 PPTLLQWLGGQLPGNQRFWTPGGVWLQS*NLKELTEGTTRSGACGL 285
           P T L W GGQ    Q    P G W  S N +       R G CGL
Sbjct: 13  PETPLSWPGGQRSTLQE--PPRGRWATSPNKRHTRRPLARGGICGL 56


>AY128689-1|AAM97540.1| 1192|Homo sapiens PI 3-kinase enhancer long
           isoform protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 280 RRLHSWWCPPSIPLSFSFATILPPESKIFGFPEAARRAIV 161
           RRL  W  PP  PLS      L P+SK  G P ++RR ++
Sbjct: 110 RRLSLWAAPPGPPLSGG----LSPDSKPGGAPSSSRRPLL 145


>U93240-1|AAC25605.1|  521|Homo sapiens importin alpha 3 protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -2

Query: 311 VIFPVLSQIKPQAPLLVVPSVNSFKFQLCNH--TPPGVQNLW--FPGSCPPSHCSNVGGS 144
           V+ P+LS I P  P+  + +V      LC H   PP ++ +    P  C   H ++V   
Sbjct: 200 VVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNIL 259

Query: 143 LDDIFTV 123
           +D ++ +
Sbjct: 260 VDTVWAL 266


>BC034493-1|AAH34493.1|  521|Homo sapiens karyopherin alpha 4
           (importin alpha 3) protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -2

Query: 311 VIFPVLSQIKPQAPLLVVPSVNSFKFQLCNH--TPPGVQNLW--FPGSCPPSHCSNVGGS 144
           V+ P+LS I P  P+  + +V      LC H   PP ++ +    P  C   H ++V   
Sbjct: 200 VVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNIL 259

Query: 143 LDDIFTV 123
           +D ++ +
Sbjct: 260 VDTVWAL 266


>BC028691-1|AAH28691.1|  521|Homo sapiens karyopherin alpha 4
           (importin alpha 3) protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -2

Query: 311 VIFPVLSQIKPQAPLLVVPSVNSFKFQLCNH--TPPGVQNLW--FPGSCPPSHCSNVGGS 144
           V+ P+LS I P  P+  + +V      LC H   PP ++ +    P  C   H ++V   
Sbjct: 200 VVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNIL 259

Query: 143 LDDIFTV 123
           +D ++ +
Sbjct: 260 VDTVWAL 266


>BC002767-1|AAH02767.1|  690|Homo sapiens LATS1 protein protein.
          Length = 690

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 266 LVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGG 147
           ++VP+ NS   +L N + PG+Q  W   S  P+  S   G
Sbjct: 409 MMVPNRNSHNMELYNISVPGLQTNWPQSSSAPAQSSPSSG 448


>AF164041-1|AAD50272.1| 1130|Homo sapiens WARTS protein kinase
           protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 266 LVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGG 147
           ++VP+ NS   +L N + PG+Q  W   S  P+  S   G
Sbjct: 409 MMVPNRNSHNMELYNISVPGLQTNWPQSSSAPAQSSPSSG 448


>AF104413-1|AAD16882.1| 1130|Homo sapiens large tumor suppressor 1
           protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 266 LVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGG 147
           ++VP+ NS   +L N + PG+Q  W   S  P+  S   G
Sbjct: 409 MMVPNRNSHNMELYNISVPGLQTNWPQSSSAPAQSSPSSG 448


>AB209426-1|BAD92663.1|  830|Homo sapiens LATS homolog 1 variant
           protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 266 LVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGG 147
           ++VP+ NS   +L N + PG+Q  W   S  P+  S   G
Sbjct: 261 MMVPNRNSHNMELYNISVPGLQTNWPQSSSAPAQSSPSSG 300


>AB002533-1|BAA19546.1|  521|Homo sapiens Qip1 protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -2

Query: 311 VIFPVLSQIKPQAPLLVVPSVNSFKFQLCNH--TPPGVQNLW--FPGSCPPSHCSNVGGS 144
           V+ P+LS I P  P+  + +V      LC H   PP ++ +    P  C   H ++V   
Sbjct: 200 VVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNIL 259

Query: 143 LDDIFTV 123
           +D ++ +
Sbjct: 260 VDTVWAL 266


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,772,118
Number of Sequences: 237096
Number of extensions: 2201677
Number of successful extensions: 4732
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4731
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)