Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00607
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    31   1.6  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    31   1.6  
AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    29   3.7  
AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    29   4.9  
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    29   6.5  

>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 218 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 78
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 218 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 78
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 408 DKSLHQLRTSMHHHPPNQE 352
           ++ +H L T+M HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 257 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 355
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETAPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 257 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 355
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETVPLAVSASSKDIKGAPSIGALDTLTATS 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,991,673
Number of Sequences: 53049
Number of extensions: 665223
Number of successful extensions: 1757
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)