Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00601
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY059455-1|AAL13361.1|  126|Drosophila melanogaster LD36923p pro...    44   1e-04
AE014134-2712|AAF53531.2|  126|Drosophila melanogaster CG4455-PA...    44   1e-04
BT001739-1|AAN71494.1|  580|Drosophila melanogaster RE72930p pro...    33   0.40 
AY069821-1|AAL39966.1|  566|Drosophila melanogaster SD07045p pro...    33   0.40 
AF241237-1|AAF63331.1|  566|Drosophila melanogaster IGF-II mRNA-...    33   0.40 
AE014298-1506|ABI30974.1|  588|Drosophila melanogaster CG1691-PI...    33   0.40 
AE014298-1505|AAN09275.1|  566|Drosophila melanogaster CG1691-PC...    33   0.40 
AE014298-1504|AAN09274.1|  566|Drosophila melanogaster CG1691-PB...    33   0.40 
AE014298-1503|AAF47958.2|  566|Drosophila melanogaster CG1691-PA...    33   0.40 
AE014298-1502|AAN09273.1|  573|Drosophila melanogaster CG1691-PH...    33   0.40 
AE014298-1501|AAN09272.1|  573|Drosophila melanogaster CG1691-PG...    33   0.40 
AE014298-1500|AAN09271.1|  573|Drosophila melanogaster CG1691-PF...    33   0.40 
AE014298-1499|AAN09270.1|  573|Drosophila melanogaster CG1691-PE...    33   0.40 
AE014298-1498|AAN09269.1|  573|Drosophila melanogaster CG1691-PD...    33   0.40 
BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p pro...    28   8.7  
AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA...    28   8.7  
AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC...    28   8.7  

>AY059455-1|AAL13361.1|  126|Drosophila melanogaster LD36923p
           protein.
          Length = 126

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +1

Query: 214 PGYTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIM 375
           P  T  E+  +  GIS +GI+ ++  ++V  + FYY  +CYP  C   +KY  M
Sbjct: 43  PPQTAKEYLDSRPGISTFGIIAIIFTVIVLCLVFYYGIICYPLLCRDDKKYRFM 96


>AE014134-2712|AAF53531.2|  126|Drosophila melanogaster CG4455-PA
           protein.
          Length = 126

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +1

Query: 214 PGYTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIM 375
           P  T  E+  +  GIS +GI+ ++  ++V  + FYY  +CYP  C   +KY  M
Sbjct: 43  PPQTAKEYLDSRPGISTFGIIAIIFTVIVLCLVFYYGIICYPLLCRDDKKYRFM 96


>BT001739-1|AAN71494.1|  580|Drosophila melanogaster RE72930p
           protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>AY069821-1|AAL39966.1|  566|Drosophila melanogaster SD07045p
           protein.
          Length = 566

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 52  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 82


>AF241237-1|AAF63331.1|  566|Drosophila melanogaster IGF-II
           mRNA-binding protein protein.
          Length = 566

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 52  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 82


>AE014298-1506|ABI30974.1|  588|Drosophila melanogaster CG1691-PI,
           isoform I protein.
          Length = 588

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 67  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 97


>AE014298-1505|AAN09275.1|  566|Drosophila melanogaster CG1691-PC,
           isoform C protein.
          Length = 566

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 52  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 82


>AE014298-1504|AAN09274.1|  566|Drosophila melanogaster CG1691-PB,
           isoform B protein.
          Length = 566

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 52  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 82


>AE014298-1503|AAF47958.2|  566|Drosophila melanogaster CG1691-PA,
           isoform A protein.
          Length = 566

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 52  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 82


>AE014298-1502|AAN09273.1|  573|Drosophila melanogaster CG1691-PH,
           isoform H protein.
          Length = 573

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>AE014298-1501|AAN09272.1|  573|Drosophila melanogaster CG1691-PG,
           isoform G protein.
          Length = 573

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>AE014298-1500|AAN09271.1|  573|Drosophila melanogaster CG1691-PF,
           isoform F protein.
          Length = 573

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>AE014298-1499|AAN09270.1|  573|Drosophila melanogaster CG1691-PE,
           isoform E protein.
          Length = 573

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>AE014298-1498|AAN09269.1|  573|Drosophila melanogaster CG1691-PD,
           isoform D protein.
          Length = 573

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 349 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 257
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 59  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 89


>BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p
           protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 113 TAGCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRR 247
           ++ C +  +SN   S   SG  G+G +   GG + G  S +T R+
Sbjct: 393 SSSCSSSSASNTAPSPLSSGGGGVGGSGGAGGAAGGASSGATGRQ 437


>AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA,
           isoform A protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 113 TAGCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRR 247
           ++ C +  +SN   S   SG  G+G +   GG + G  S +T R+
Sbjct: 393 SSSCSSSSASNTAPSPLSSGGGGVGGSGGAGGAAGGASSGATGRQ 437


>AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC,
           isoform C protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 113 TAGCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRR 247
           ++ C +  +SN   S   SG  G+G +   GG + G  S +T R+
Sbjct: 337 SSSCSSSSASNTAPSPLSSGGGGVGGSGGAGGAAGGASSGATGRQ 381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,994,987
Number of Sequences: 53049
Number of extensions: 591663
Number of successful extensions: 1700
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)