Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00599
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 309 1e-84
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 309 1e-84
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 301 3e-82
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 243 1e-64
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 194 5e-50
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 194 5e-50
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 177 9e-45
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 86 2e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 86 2e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 2e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 2e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 2e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 7e-07
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 1e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 36 0.040
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.091
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.12
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.64
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.9
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 28 7.9
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 28 7.9
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 28 7.9
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 7.9
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 7.9
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 309 bits (759), Expect = 1e-84
Identities = 146/155 (94%), Positives = 149/155 (96%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 404
DKLKAERER ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 405 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
GEFEAGISKNGQTREHALLA TLGVKQLIV NKM
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKM 155
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQPKCLGSRD-A 685
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVP + + A
Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Query: 686 VERKEGKADGKCLIEALD 739
VERKEG A GK L+EALD
Sbjct: 216 VERKEGNASGKTLLEALD 233
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 309 bits (759), Expect = 1e-84
Identities = 146/155 (94%), Positives = 149/155 (96%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 404
DKLKAERER ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 405 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
GEFEAGISKNGQTREHALLA TLGVKQLIV NKM
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKM 155
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQPKCLGSRD-A 685
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVP + + A
Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Query: 686 VERKEGKADGKCLIEALD 739
VERKEG A GK L+EALD
Sbjct: 216 VERKEGNASGKTLLEALD 233
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 301 bits (739), Expect = 3e-82
Identities = 141/149 (94%), Positives = 145/149 (97%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 404
DKLKAERER ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 405 GEFEAGISKNGQTREHALLAFTLGVKQLI 491
GEFEAGISKNGQTREHALLA TLGVKQL+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 243 bits (594), Expect = 1e-64
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 395
DKLKAERER ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQPKCLGSRD-A 685
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVP + + A
Sbjct: 122 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 181
Query: 686 VERKEGKADGKCLIEALD 739
VERKEG A GK L+EALD
Sbjct: 182 VERKEGNASGKTLLEALD 199
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 194 bits (473), Expect = 5e-50
Identities = 90/152 (59%), Positives = 113/152 (74%)
Frame = +3
Query: 54 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 233
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 234 KAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 413
+ ERER +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 414 EAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
E G GQT+EHALL +LGV QLIV VNK+
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKL 318
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 194 bits (473), Expect = 5e-50
Identities = 90/152 (59%), Positives = 113/152 (74%)
Frame = +3
Query: 54 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 233
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 234 KAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 413
+ ERER +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 414 EAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
E G GQT+EHALL +LGV QLIV VNK+
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKL 336
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 177 bits (430), Expect = 9e-45
Identities = 79/154 (51%), Positives = 110/154 (71%)
Frame = +3
Query: 48 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 227
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 228 KLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
ERE+ T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 408 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
EFE G + GQTREH++L T GVK L++ VNKM
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKM 257
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 497 SKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVP 619
+K +D T + E RF+EI+ +++ +++K+G+NP + +VP
Sbjct: 255 NKMDDPTVK-WEEERFKEIEGKLTPFLRKLGFNPKTDITYVP 295
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAER 245
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 86.2 bits (204), Expect = 2e-17
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 230
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 231 LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 410
K E++R ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 411 FEAGISKNGQTREHALLAFTLGVKQLIVGVNK 506
E QT+EH +LA +GVK + + +NK
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINK 170
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 86.2 bits (204), Expect = 2e-17
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 230
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 231 LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 410
K E++R ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 411 FEAGISKNGQTREHALLAFTLGVKQLIVGVNK 506
E QT+EH +LA +GVK + + +NK
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINK 170
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 230
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 231 LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 410
E+ R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 411 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKM 509
QTREH LLA +GV ++V +NK+
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKV 177
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 230
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 231 LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 410
E+ R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 411 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKM 509
QTREH LLA +GV ++V +NK+
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKV 178
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 230
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 231 LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 410
E+ R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 411 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKM 509
QTREH LLA +GV ++V +NK+
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKV 178
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/147 (30%), Positives = 65/147 (44%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 249 RRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R IT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
QT + LAF + Q+I +NK+
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKI 164
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/113 (33%), Positives = 52/113 (46%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 249 RRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
R IT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 51.2 bits (117), Expect = 7e-07
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 249 RRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
R ITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 197
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 198 GSFKYAWVLDK-----LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 362
+ + L+K +K E + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFE-TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 363 SQADCAVLIVAAGTG 407
D A+++V +G
Sbjct: 132 GVTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.2 bits (97), Expect = 2e-04
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 66 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 245
+N+ ++GHVDSGK+T T + E+G S A +
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTT-TDG 53
Query: 246 ERRITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 422
RR T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 423 ISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRR 560
I QT EH LLA ++I+ +NK +S +K R+
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAEKSKISESAKKVRK 152
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 197
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 198 GSFKYAWVLDK-----LKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 362
+ + L+K +K E + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFE-TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 363 SQADCAVLIVAAGTG 407
D A+++V +G
Sbjct: 132 RVTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 39.9 bits (89), Expect = 0.002
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Frame = +3
Query: 21 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 191
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 192 GKGSFKYAWVL------DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 353
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 354 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK-QLIVGVNKMIPLN 521
G + D +L++ A G G T+EH LA +L V L+V M P N
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLVVTKIDMCPAN 296
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 ITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 431
IT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE----- 243
Query: 432 NGQTREHALLAFTLGVKQLIVGVNKM 509
QT + A V QL+V VNK+
Sbjct: 244 --QTAQSIKFAKDANV-QLVVAVNKI 266
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 35.5 bits (78), Expect = 0.040
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 51 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 227
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 228 KLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 392
+ E+ R IT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 35.5 bits (78), Expect = 0.040
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 51 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 227
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 228 KLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 392
+ E+ R IT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.091
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Frame = +3
Query: 21 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 191
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 192 GKGSFKYAWVL------DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 353
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 354 TGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 494
G + + +L++ A G G T+EH LA +L V +V
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV 287
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 249 RRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 249 RRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 505 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 377
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 300 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 479
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 480 KQLIVGVNKM 509
L++ NK+
Sbjct: 182 NHLMILQNKV 191
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Frame = +3
Query: 66 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 245
+N+ ++GHVDSGK+T T + E+G S A +
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHA-TSTTTDG 53
Query: 246 ERRITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 422
RR T+D+ + S + +ID PGH I+ ++ ++ D A+ +++ + G
Sbjct: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKG 112
Query: 423 ISKNGQTREHALLAFTL 473
+ G ++ +L
Sbjct: 113 LKSMGVDENSPIVEMSL 129
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.0
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 6/174 (3%)
Frame = +3
Query: 6 RDYTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC----GGIDKRTIEKFE 173
R + ++R P+ ++ + + V+G D GKST G L C G + I +F
Sbjct: 150 RTVVEVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIFRFP 208
Query: 174 KEAQEMGKGSFKYAWVLDKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 353
E + GK S V+ + + E S VT+ID G + K I
Sbjct: 209 HEVR-TGKTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTI 267
Query: 354 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
G + A L+VAA + GI+ TREH L L + ++ + KM
Sbjct: 268 HGLTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKM 313
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 309 IIDAPGHRDFIKNMITGTSQADCAVLIV 392
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 303 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 398
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 690 STASLEPRHFG*RLQHVVSVPSRNGTKATAAGL*PIFLMYEDTSFLISSNLGSLYGGSVE 511
+TA + HF R QHV S PSR+ G+ ++ T ++S + G ++
Sbjct: 10 NTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLID 69
Query: 510 SFCLLLR 490
+F L R
Sbjct: 70 TFLNLER 76
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 690 STASLEPRHFG*RLQHVVSVPSRNGTKATAAGL*PIFLMYEDTSFLISSNLGSLYGGSVE 511
+TA + HF R QHV S PSR+ G+ ++ T ++S + G ++
Sbjct: 43 NTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLID 102
Query: 510 SFCLLLR 490
+F L R
Sbjct: 103 TFLNLER 109
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 690 STASLEPRHFG*RLQHVVSVPSRNGTKATAAGL*PIFLMYEDTSFLISSNLGSLYGGSVE 511
+TA + HF R QHV S PSR+ G+ ++ T ++S + G ++
Sbjct: 43 NTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLID 102
Query: 510 SFCLLLR 490
+F L R
Sbjct: 103 TFLNLER 109
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = -3
Query: 488 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 330
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 329 VSRSINDGNIVLASFELPESNIDCDPTLTLSL*FVQYPSI 210
S S +D E+P ++ C+ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 485 AHRRSKQNDSTEPPYSEPRFEEIKKEV 565
AHRR K ND + P YS E++ V
Sbjct: 124 AHRRKKHNDLSSPRYSSNSNEDVDGSV 150
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 485 AHRRSKQNDSTEPPYSEPRFEEIKKEV 565
AHRR K ND + P YS E++ V
Sbjct: 186 AHRRKKHNDLSSPRYSSNSNEDVDGSV 212
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 3574 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 3627
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 4528 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 4581
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 5431 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 5484
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 6334 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 6387
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 7237 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 7290
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 500 KQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPFLDGTETTCWSLQP 661
+ N P P+ EE+KKEV + I P++ A V L+ T +L P
Sbjct: 8140 RHNAEAVPTQYAPKAEELKKEVEAAKAVIANAPSSDAHVQQLEQAVATAETLIP 8193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,061,324
Number of Sequences: 27780
Number of extensions: 364867
Number of successful extensions: 1155
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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