Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00597
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 40 0.003
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 35 0.061
SB_51107| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 33 0.19
SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 32 0.43
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.57
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 31 1.3
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 30 1.7
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 30 1.7
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_50572| Best HMM Match : DUF848 (HMM E-Value=3.6) 30 1.7
SB_9624| Best HMM Match : PAPA-1 (HMM E-Value=1.2) 30 1.7
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 30 2.3
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_14439| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_42730| Best HMM Match : Ank (HMM E-Value=0.00016) 29 3.0
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 29 3.0
SB_26253| Best HMM Match : REX1 (HMM E-Value=1.2) 29 3.0
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 3.0
SB_32266| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26603| Best HMM Match : SNF (HMM E-Value=0) 29 3.0
SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37) 29 4.0
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 29 4.0
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_22625| Best HMM Match : GIY-YIG (HMM E-Value=0.38) 29 4.0
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44) 29 4.0
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 5.3
SB_54083| Best HMM Match : GIY-YIG (HMM E-Value=0.059) 29 5.3
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 29 5.3
SB_59222| Best HMM Match : Filament (HMM E-Value=0.95) 28 7.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 7.0
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.0
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 7.0
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 28 9.3
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 28 9.3
SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30) 28 9.3
SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3) 28 9.3
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/98 (27%), Positives = 49/98 (50%)
Frame = +2
Query: 239 AGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQA 418
AGTR + + L+E + + N + KATL +A+ KT K+ S Q +S +QA
Sbjct: 187 AGTRPKGKSSTFSVTLTLNEPEQEDSNSGKHEKATLPSASS-DKTYKKPSKQAIQSEEQA 245
Query: 419 IQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRP 532
++ + K A+ ++S EL++P +++P
Sbjct: 246 MKQSRKETNDTSKKNASNSVLSSGNSELISPSDMKKQP 283
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 509 PVTRRRRPGTWPSKRKRNMPTKLLRPPTKSRRKRPLP 619
P RRRR PS+R+R+ PT PP + RRK P P
Sbjct: 894 PPRRRRRDSYSPSRRRRDSPTP--SPPPRRRRKSPSP 928
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 35.1 bits (77), Expect = 0.061
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 236 LAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQ 415
L G S + E L A+LD+L+ Q K+ +N + + +K+ D+ ESHK+
Sbjct: 3044 LHGKVSQKNSENELLHAQLDDLRKQITGYQGNIKSLEENSNRLQERIKDLEDENLESHKK 3103
Query: 416 AIQATMDVPAVQEKVAAAEES 478
A ++ E + A+ +
Sbjct: 3104 ASSLECELSTANENLKEAQNN 3124
>SB_51107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 245 TRSHRQEELNDLLAKLDELQAQAKNDVEL---TKATLTAANEIYKTLKEFSDQVTESHKQ 415
T ++R++ L+D L L + K+ ++L L NE+ LKEF++ +T+ K+
Sbjct: 54 TLTYREQVLSDDSVLLSSLYLREKDVLQLQFLASGKLDEMNELISNLKEFAEAITDDSKR 113
Query: 416 AIQATMDVPAVQEKVAAAEESINSI 490
+ V + E + EE N +
Sbjct: 114 HDEILTLVESRCESTSEDEEDANPL 138
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 105 NKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHN 206
NKLHEDS+E+ RTI + ++ ++ + +D HN
Sbjct: 128 NKLHEDSLEVKRTIGDLESDY-KMSMDEKDNAHN 160
>SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 32.3 bits (70), Expect = 0.43
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +2
Query: 314 KNDVELTKATLTAANEIYKTLKEF---SDQVT-ESHKQAIQATMDVPAVQEKVAAAEESI 481
K++++ K A + L+++ D++ E HKQ + ++ A++S+
Sbjct: 167 KDEIDNLKTKRPATRDYVGVLQQWRASDDEILQELHKQRKEMKQSFEEAKQSFEEAKQSL 226
Query: 482 NSITEELVAPVTRRRRPGTWPSKRKRNMPTKLLRPPTKSRRKRPLPKQKL*T*ETSQTN 658
+ T+RRR T KR+R+ TK R TK RR ++ ETS N
Sbjct: 227 KEAKQSFEGSETKRRRSET---KRRRS-ETKRRRSETKRRRSETKRRRS----ETSNNN 277
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +3
Query: 105 NKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGH 254
+K+ E+ ++ T++EK D+++ E L NLE+ + + +++ H
Sbjct: 295 DKMLEEELKKRETLEEKQKLQDKILEEERKRLENLEKERQAAQQAMQEAH 344
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +2
Query: 236 LAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKT---LKEFSDQVTES 406
L + + + + L AKL + + + V L + TA +++Y + + QV
Sbjct: 1021 LTNDNADKTQRILFLEAKLGDYEGEVDTAVRLKE---TAEDDVYGLRGRIVKLESQVETV 1077
Query: 407 HKQAIQATMDVPAVQEKVAAAEESINSITEELV 505
HK +Q T + +K+ + ESI S+ ++V
Sbjct: 1078 HKHKMQVTSQLEEANKKLVRSRESIMSLESQVV 1110
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/75 (20%), Positives = 37/75 (49%)
Frame = +2
Query: 275 DLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVPAVQE 454
D + + +L Q +++ E + E+ KT+K +++V+E ++ + D+ E
Sbjct: 832 DAVDREKDLAGQLEDEREKNQFLQMDNEELKKTIKTLTNKVSEKQREVDRLENDMDVAAE 891
Query: 455 KVAAAEESINSITEE 499
K+ + + ++EE
Sbjct: 892 KIISLNLEVEKVSEE 906
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 60 LYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLE 212
L A+++ +IKLNKL D M I E DR+ ENE + +E
Sbjct: 1408 LKADIDELKAENIKLNKLIND---MEAGIKRTQTESDRIAFENESNVKKIE 1455
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 HRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLK---EFSDQVTESHKQAIQ 424
+ Q +L + L+ + KND + KA L AAN L+ EFSD+ S K+ +
Sbjct: 1277 YHQGQLERKITDLETANERLKNDKKDLKADLIAANATITDLELKTEFSDKEIVSLKKQLD 1336
Query: 425 ATM 433
M
Sbjct: 1337 DAM 1339
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +2
Query: 263 EELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVP 442
EE + +E +A+ E +A + E K K S ++TE+ + +A V
Sbjct: 96 EEAEAADEETEEPVKEAEGSFEEAEAPVVETEEPVKEAKA-SVEITEAPIEEAKAPERVE 154
Query: 443 AVQEKVAAAEESINSITEELVAPV 514
+ E+ A EE + + EE+ APV
Sbjct: 155 SSVEEAEAPEEEVEAPVEEVEAPV 178
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 287 KLDELQAQAKNDVELTKATLTAANEIYK 370
KL+EL + +N+VEL KAT +A+ +Y+
Sbjct: 692 KLEELTSFVQNEVELGKATAVSASLVYR 719
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 188 RRHPSQFRGGHKARSGLAGTRSHRQEELNDLLAKLDELQAQAK-NDVELTKATLTAANEI 364
RR F KA A +EE+ L A+L ELQ + K D + A+ N I
Sbjct: 874 RREKKVFEKYQKAAR--ANPDKKEREEIESLKAQLSELQEEMKRRDSRWSAASARYRNRI 931
Query: 365 YKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWP 544
+ L+E + ++ E K + +D+ ++ A +E+ T + RP P
Sbjct: 932 -EALEEQNKELQEEVKLLEKYRLDLWRTEQDKAGNDENSGKETRPRKEKQRKTARPSEQP 990
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 RQEELNDLLAKL-DELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATM 433
+ EL L +L DEL+ Q + + A A+++I + + FS++ TE Q
Sbjct: 1400 KSSELEQELGQLRDELRQQQELLRDKESALAAASSKIEEKIANFSERETELESQVRALES 1459
Query: 434 DVPAVQEKVAAAEESINSITEEL 502
++ +V EES+ E+L
Sbjct: 1460 QCEELEYRVKEKEESLLLANEKL 1482
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 242 GTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 394
G R+E+ LA D+ +N++ K L A E KTL E SD+
Sbjct: 1567 GFALEREEQFKAELADKDDCIQATENELNQVKHQLQLAQEAKKTLLEASDE 1617
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Frame = +3
Query: 3 ARADQALKRARAVYDEALGLYAEVNTTLLPDI--KLNKLHEDSMEMNRTIDEKSAELDRL 176
AR ++ L+ R YD A+ L T + + K+N + E +D L+++
Sbjct: 920 ARIEELLEEKRLNYD-AMQLSEREATQVRREFESKINLTEKLLKETTEKLDVAETRLEKV 978
Query: 177 IAENEDT---LHNLEEGIRRGRDLLEQGHTGRRNSTISSLS 290
++EN D+ + L+E + L +T +N IS L+
Sbjct: 979 LSENSDSQSKIQRLQETVSHVEQRLTDSNTSDQN-LISELN 1018
>SB_50572| Best HMM Match : DUF848 (HMM E-Value=3.6)
Length = 238
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/75 (21%), Positives = 31/75 (41%)
Frame = +2
Query: 383 FSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWPSKRKRN 562
F+ + ES K +Q + + + ++ A++ + SIT +T + K
Sbjct: 45 FTRHLEESSKSTLQLSRQIEKAEMSISDAQKGLKSITLNPPTTITETQATAVGKPSIKAR 104
Query: 563 MPTKLLRPPTKSRRK 607
PT L P + R+
Sbjct: 105 SPTSTLGPQFEQGRR 119
>SB_9624| Best HMM Match : PAPA-1 (HMM E-Value=1.2)
Length = 278
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/113 (18%), Positives = 47/113 (41%)
Frame = +2
Query: 245 TRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQ 424
T+ E+ + ++ L+A + V + + T A E+ + ++E ++
Sbjct: 75 TKCSCSNEIGKIWEAIESLRAASNGSV--SSQSQTNAREM-QMIRERDAEINSLRLHIRS 131
Query: 425 ATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWPSKRKRNMPTKLLR 583
++V + E+ +I + E VA R R P P ++N P + ++
Sbjct: 132 LELEVKRITEEKQGLVRAIGVLQENYVAADIRERNPHAKPESARQNQPIECIQ 184
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 194 HPSQFRGGHKARSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKT 373
H + R + R L +EE+N+ A++ L+++ ++ TK ANE+ T
Sbjct: 222 HEEEVRRMKEERKDLCEEIKALREEVNEFKARVSHLKSEERSLDRRTKELTNNANELEFT 281
Query: 374 LKE 382
L+E
Sbjct: 282 LRE 284
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 368 KTLKEFSDQVTESHKQAIQATMDVP--AVQEKVAAAEESINSITEELV 505
K L+EF ++V K AI+ MD+P + + +E +N EELV
Sbjct: 270 KFLREFGEKVILKRKAAIEKGMDMPKDVLNHLLYMCKEDVNVPMEELV 317
>SB_14439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 21 LKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTL 200
L A +++ + + V T+L D+K H+D + + + LIA +T+
Sbjct: 502 LLEIEATFEKNIQILKAVKKTIL-DVKATTWHDDFNRFRAGVKDLEVMVQNLIASAFETV 560
Query: 201 HNLEEGI 221
+EEG+
Sbjct: 561 TTVEEGV 567
>SB_42730| Best HMM Match : Ank (HMM E-Value=0.00016)
Length = 999
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 3 ARADQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIA 182
+ A+ + + Y+E AE + +P+ L L+E+ M+ T DEK E +
Sbjct: 220 SEAEGLEENGQDTYEEEEDEEAEEELSGVPESNL--LNEEEMKEEETHDEKPEENPEVPE 277
Query: 183 ENEDTLHNLEEGIRRGRD 236
NE+ + RRG D
Sbjct: 278 VNEEDFIRAADARRRGED 295
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 374 LKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWPSKR 553
L++ QV ++ ++ V++K +++ES V + G P K
Sbjct: 311 LEDLEQQVLSKQEKQLKKE-PADTVEDKPPSSQESTGQDMAAFFKLVETMKSSGHLPEKP 369
Query: 554 KR---NMPTKLL-RPPTKSRRKRPLPKQKL 631
+ +P+K L RPP+ K P P QKL
Sbjct: 370 QPVIPGLPSKYLPRPPSPKLSKSPSPLQKL 399
>SB_26253| Best HMM Match : REX1 (HMM E-Value=1.2)
Length = 154
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/84 (20%), Positives = 36/84 (42%)
Frame = +2
Query: 272 NDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVPAVQ 451
NDL EL+ + ++LT A +E++ K+F Q+ + D+ Q
Sbjct: 33 NDLRQTKGELKLEKTRTMDLTMAVQEKDSELFNLQKDFDQQMQAVTSALLILESDIRKEQ 92
Query: 452 EKVAAAEESINSITEELVAPVTRR 523
+++ + + + EL + +R
Sbjct: 93 KEIQLDADKKDYLIRELTEELRKR 116
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 269 LNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQ-ATMDVPA 445
L D +++L +KN++ KA L AN+ L++ + + +++ +Q A +
Sbjct: 656 LRDKEEDMEDLDKNSKNEINSLKAKLAKANDELSDLRDELSETKQGYEKVMQKAKQEASL 715
Query: 446 VQEKV 460
+EK+
Sbjct: 716 FKEKL 720
>SB_32266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 368 KTLKEFSDQVTESHKQAIQATMDVP--AVQEKVAAAEESINSITEELV 505
K L+EF ++V K AI+ MD+P + + +E +N EELV
Sbjct: 13 KFLREFGEKVILKRKAAIEKGMDMPKDVLNHILYMCKEDVNVPMEELV 60
>SB_26603| Best HMM Match : SNF (HMM E-Value=0)
Length = 518
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 27 RARAVYDEALGLYAEVNTTLLPDIK 101
+A YDE + LY VN TLLP+ K
Sbjct: 218 QANRSYDECIALYGGVNGTLLPENK 242
>SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37)
Length = 1147
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 299 LQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEES 478
LQ +++++L K T E+ E D + Q DV +VQ+KV +S
Sbjct: 557 LQKWNEDELDLFKKTQEVRKEVQGVSHEVQDLKQAMNSQIQGVGADVQSVQQKVEGVGQS 616
Query: 479 IN 484
+N
Sbjct: 617 VN 618
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/124 (22%), Positives = 45/124 (36%)
Frame = +2
Query: 287 KLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAA 466
K Q Q K +A+ KT K + KQA P Q+K AA
Sbjct: 29 KTSNPQDQDKQAARPRQASRKTKTSKTKTSKPQDQDKQDQDKQAASRKRSKPQDQDKKAA 88
Query: 467 AEESINSITEELVAPVTRRRRPGTWPSKRKRNMPTKLLRPPTKSRRKRPLPKQKL*T*ET 646
+ T+ TR R+ + K +N P K + + ++ K++ T +
Sbjct: 89 RPRQASRKTKTSKPQATRPRQASS-KKKTSKNKPGKPQEKDKQEQARQAARKRQARTSQA 147
Query: 647 SQTN 658
S+ N
Sbjct: 148 SRKN 151
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +2
Query: 227 RSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTL---KEFSDQV 397
R+ L + +E+N L A+L + + + + K L +++ K L KE+ +
Sbjct: 602 RASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRERDQLMKELAKDKEYYGNI 661
Query: 398 T---ESHKQAIQATMDVPAVQEKVAAAEESINSITEE 499
E+H +++ D +++EKV AEE I + +
Sbjct: 662 IKTMEAHNGSLEK--DKTSLEEKVRTAEEEIRQLVSQ 696
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = +2
Query: 251 SHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQAT 430
S EE + +L+ + A+ E+ + T NE+ + L + ++TE + + T
Sbjct: 914 SQISEEKAIVAEQLESEREVAQETEEMRQRLQTKKNELEELLSDLEGRITEEEENVLALT 973
Query: 431 MDVPAVQEKVAAAEESI 481
D + +++ E+S+
Sbjct: 974 EDKKKLLKEIQDLEDSL 990
>SB_22625| Best HMM Match : GIY-YIG (HMM E-Value=0.38)
Length = 382
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 558 GICRQSF*GRPRNQEESVRCQSKSCELERRVRQTDYSCAKY 680
G C F R RN + S+R K+CE+ + +++++ + +
Sbjct: 317 GSCTTEFKVRFRNHKSSMRTNKKTCEVAKHFNRSEHNLSDF 357
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 84 LLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHTGR 263
LLP+ L+K H E+N T D S+++ A+N H +E + D Q T +
Sbjct: 1230 LLPNSSLSKSHYMERELNSTFD-ASSQMTTKAAQNLSKAHYMERELDSTFDDSSQ-MTSK 1287
Query: 264 RNSTISSLSWM 296
S++S +M
Sbjct: 1288 AASSLSKSHYM 1298
>SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44)
Length = 851
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -1
Query: 349 CQRGFREFHIVFSLRLQLIQLSEEIVEFLLPV*PCSSKS 233
C++ R F I+ +L +Q+ L+E + LPV PC SK+
Sbjct: 266 CRQFGRGFRILTALTVQIRILNEFRLMLCLPVKPCGSKN 304
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/90 (22%), Positives = 46/90 (51%)
Frame = +2
Query: 236 LAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQ 415
L G RS +E ++++ A+L E +++ +EL K L + KT++E +++ K
Sbjct: 403 LGGERSKVKELVHEI-AELKEKLQESEKVIELRKKDLGKKD---KTIEELKERIIVLEKS 458
Query: 416 AIQATMDVPAVQEKVAAAEESINSITEELV 505
++ ++ K+A E + + ++L+
Sbjct: 459 LKDKNDEIFGIEGKIAELEAKNDRLHDDLM 488
>SB_54083| Best HMM Match : GIY-YIG (HMM E-Value=0.059)
Length = 333
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 558 GICRQSF*GRPRNQEESVRCQSKSCELERRVRQTDYSCAKY 680
G C F R RN + S+R K+CE+ + ++++ + +
Sbjct: 237 GSCTTEFKVRFRNHKSSMRTNKKTCEVAKHFNHSEHNLSDF 277
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +3
Query: 12 DQALKRARAVYDEALGLYAEVNTTLLP--DIKLNKLHEDSMEMNRTIDEKSAELDRLIAE 185
D++L+ DE+L E TL D L L E E T+DE E + E
Sbjct: 37 DESLETLDESLDESLETLDEPLETLDESLDESLETLDESPDESLETLDESLDESLETLDE 96
Query: 186 NEDTLHNLEEGIRRGRD-LLEQGHTGRRNSTISSL 287
+ +TLH E ++ + LLE H S SL
Sbjct: 97 SLETLHESLETLQESLEKLLESLHESLDESLDESL 131
>SB_59222| Best HMM Match : Filament (HMM E-Value=0.95)
Length = 411
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Frame = +2
Query: 218 HKARSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTL----KEF 385
HK A + +Q+ DL K DEL+ + + K + E+ K L KE
Sbjct: 281 HKLEEVTAEKEAEKQQIREDLSKKYDELRFHKDSVIAKLKDKIREKIELNKKLNIEHKEK 340
Query: 386 SDQVTESHKQAI----QATMDVPAVQEKVAAAEESINSITEEL 502
+ HK+AI + + A++E++A E + S E+L
Sbjct: 341 LGNTVKEHKKAINELNERLSNEIALKEELAFELEKLVSEVEQL 383
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/109 (20%), Positives = 55/109 (50%)
Frame = +2
Query: 176 DS*ERRHPSQFRGGHKARSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAA 355
D +++HP+ + G + + QEEL + + EL+ + ++ E A L+
Sbjct: 1012 DGDQQKHPNIVKQSDSDLQGHSDSIKRLQEELKERNSAHQELEQKMQDLRENFSADLSEL 1071
Query: 356 NEIYKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEEL 502
+ +K ++E + + + +A+++ + + +V+EK+ E + + E+L
Sbjct: 1072 EQNFKIIEE-ENSALKLNVEALESELQL-SVKEKL-ENEHILRGLREDL 1117
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 72 VNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEE 215
V T I++ KL E+ ++ + ++ E D+L+ E LH + E
Sbjct: 4371 VEATQQAAIEIEKLCEEKQKLAEHLQNQARENDKLVREEGQYLHRIHE 4418
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 317 NDVELTKATLTAANEIYKTLKEFSDQVTESHKQAI 421
N + + L NE Y+ L+E DQ+ +H+Q +
Sbjct: 97 NSCPVCRHELPTDNEAYEELRELKDQLQNTHQQKV 131
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 248 RSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTES-HKQ 415
+ R EL LA + + D+E TKA L + E + LK+ +++TE+ HK+
Sbjct: 600 KQSRISELEQELASNQLSYEELQTDLEFTKAELQSTVEDNEALKKQVEELTETIHKK 656
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 QEELNDLLAKLDELQAQA-KNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMD 436
Q+E++DLL K+ EL A K + EL+ AA E + T+ D ++ +D
Sbjct: 2975 QDEVDDLLRKIKELTATLNKREAELS-VVEQAAEEYHVTVAHVEDVFASAYD-----AVD 3028
Query: 437 VPAV-QEKVAAAEESINSI 490
PAV AEE ++ I
Sbjct: 3029 APAVFGTDTDHAEEQLHKI 3047
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 9.3
Identities = 30/126 (23%), Positives = 52/126 (41%)
Frame = +2
Query: 197 PSQFRGGHKARSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTL 376
PS+ G H ARS A TR + E D L + K ++T T + +I ++
Sbjct: 833 PSEGNGLHAARSETALTRKRKPE---------DTLTSSVKERKDMT--TSKSEGQIKRSR 881
Query: 377 KEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWPSKRK 556
+ + S +++ + ++EK ++S NS+ E+ P R+ P
Sbjct: 882 SKRITDMVSSKINSLRPSKSNENIKEK----QKSGNSLAFEITPPKKRKAEPKAASDTTP 937
Query: 557 RNMPTK 574
R TK
Sbjct: 938 RRESTK 943
>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
Length = 867
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 167 GPFDS*ERRHPSQFRGGHKARSGLAGTRSHRQEELNDLL 283
GP + ERR S G +K +S T S ++EELN +L
Sbjct: 165 GPSITVERRINSDGSGSYKLKSHSGKTVSTKKEELNHIL 203
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Frame = +2
Query: 227 RSGLAGTRSHRQEELNDLLAKLDELQAQAKN------DVELTKATLTAANEIYKTLKEFS 388
++ L+ T ++EEL + KLD L+ + +N +++ +++ K L+ S
Sbjct: 599 KTKLSRTVREKEEELESTMQKLDGLRVEIRNADRKRRELQAQVEEMSSEANREKKLRVRS 658
Query: 389 DQVTESHKQAIQATMD----VPAVQEKVAAAEESINSITEELVAPVTRR-RRPGTWPSKR 553
DQ ++ ++ I+ + + ++ K A+ E + +++ ++R ++ T R
Sbjct: 659 DQYSKQLEEEIEYLKELSEKIQEIETKKASLENECWRKAKIVLSLFSQREQQEMTLEMNR 718
Query: 554 KRNMPTKLLRPPTK 595
K KLLR K
Sbjct: 719 KNERERKLLREENK 732
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/88 (22%), Positives = 40/88 (45%)
Frame = +2
Query: 236 LAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQ 415
L GT S +Q+EL++LL +E +A+ + A E+Y + +Q + +
Sbjct: 98 LQGTISQQQQELDNLLPSYNEYRAEEEQCTLRLSACEQRRTELY-AKQGRKNQFSSKEAR 156
Query: 416 AIQATMDVPAVQEKVAAAEESINSITEE 499
++ ++ VA E I ++ +E
Sbjct: 157 DNWIKKEMKSLTSTVAKKESQIQALQQE 184
>SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30)
Length = 824
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 245 TRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQ 424
T + Q+E++ L + DEL+ Q ++ E + T + +E S +T+ + +Q
Sbjct: 237 TSTELQDEVDALRQRKDELKTQLRDSQEELEKTKDGLRSLRSKWQEKSGLITQMESEVVQ 296
>SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3)
Length = 743
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 236 LAGTRS--HRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESH 409
+ G RS H EE L +LD ++ + + + ELTK + +KT S T
Sbjct: 140 MEGARSSKHHSEESEGLCLRLDSIEDEEEEEEELTKL------KEFKTPAPVSSTETSQS 193
Query: 410 KQAIQATMDVPAVQEKVAAAE 472
AI + D ++ AA+
Sbjct: 194 SLAITSDADGSNESSRIQAAQ 214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,344,655
Number of Sequences: 59808
Number of extensions: 315556
Number of successful extensions: 1642
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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