SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00597
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         54   5e-09
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         54   5e-09
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         54   5e-09
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    54   5e-09
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         54   6e-09
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           27   0.47 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   0.47 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.47 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.82 
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    24   4.4  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   5.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.8  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   7.6  

>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 54.0 bits (124), Expect = 5e-09
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 12  DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENE 191
           +QAL RAR V DEAL L+A VN T  P+I ++K+ +++ + NR  D  + +L   + ++ 
Sbjct: 124 EQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHA 183

Query: 192 DTLHNLEEGIRRGRDLLEQ 248
             L N+   I     LL++
Sbjct: 184 QLLENVGTNIELAETLLDR 202


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 54.0 bits (124), Expect = 5e-09
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 12  DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENE 191
           +QAL RAR V DEAL L+A VN T  P+I ++K+ +++ + NR  D  + +L   + ++ 
Sbjct: 124 EQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHA 183

Query: 192 DTLHNLEEGIRRGRDLLEQ 248
             L N+   I     LL++
Sbjct: 184 QLLENVGTNIELAETLLDR 202


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 54.0 bits (124), Expect = 5e-09
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 12  DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENE 191
           +QAL RAR V DEAL L+A VN T  P+I ++K+ +++ + NR  D  + +L   + ++ 
Sbjct: 124 EQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHA 183

Query: 192 DTLHNLEEGIRRGRDLLEQ 248
             L N+   I     LL++
Sbjct: 184 QLLENVGTNIELAETLLDR 202


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 54.0 bits (124), Expect = 5e-09
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 12   DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENE 191
            +QAL RAR V DEAL L+A VN T  P+I ++K+ +++ + NR  D  + +L   + ++ 
Sbjct: 1263 EQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHA 1322

Query: 192  DTLHNLEEGIRRGRDLLEQ 248
              L N+   I     LL++
Sbjct: 1323 QLLENVGTNIELAETLLDR 1341



 Score = 30.3 bits (65), Expect = 0.066
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +1

Query: 511  SDKAKEARDLAQQAQKEYADXXXXXXXXXXXXXXXXXXXXVNLRDESDKLITRVRSTEKQ 690
            S  A++AR  AQ AQ +YA+                     +L  E+D+L  R+  T+ +
Sbjct: 1430 SRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNR 1489

Query: 691  IEELE 705
            +EE E
Sbjct: 1490 LEERE 1494


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 53.6 bits (123), Expect = 6e-09
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 12  DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENE 191
           +QAL RAR V DEAL L+A VN T  P+I ++K+ +++ + NR  D  + +L   + ++ 
Sbjct: 124 EQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLATKMRDHA 183

Query: 192 DTLHNLEEGIRRGRDLLEQ 248
             L N+   I     LL++
Sbjct: 184 QLLENVGTNIELAETLLDR 202


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 185 ERRHPSQFRGGHKARSGLAGTRSHRQEELN 274
           ERRHP   R G + RS  AG R  R +EL+
Sbjct: 178 ERRHPYTRRSGGQQRS--AGWRQSRSDELD 205


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 21/85 (24%), Positives = 36/85 (42%)
 Frame = +2

Query: 248 RSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQA 427
           + HR      L+AK D      + D+E  K    A  E Y T++     V ++ + AI+ 
Sbjct: 345 QEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDV-QAKQAAIER 403

Query: 428 TMDVPAVQEKVAAAEESINSITEEL 502
            M      E+V   ++    I ++L
Sbjct: 404 GM--RNASERVTRIQKDARQIEQDL 426


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 20/83 (24%), Positives = 32/83 (38%)
 Frame = +2

Query: 365 YKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAPVTRRRRPGTWP 544
           Y +L   +D +   +K A  +   +P  +                  +P  RRR   T P
Sbjct: 226 YISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRP 285

Query: 545 SKRKRNMPTKLLRPPTKSRRKRP 613
           +   R+ PT   +P    RR+RP
Sbjct: 286 TSWPRSRPTS--KPKRLPRRRRP 306


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 506 APVTRRRRPGTWPSKRKRNMPTKLLRPPTKSRRKRPLPKQK 628
           AP  RRRR     ++R+R  P     PP  +R  R  P ++
Sbjct: 488 APEGRRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRR 528


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 229 VGTCWNKVTQAGG 267
           V TC NK+T AGG
Sbjct: 56  VRTCMNKITNAGG 68


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 639 ERRVRQTDYSCAKYGETDRGVGEKAADNMQ 728
           ER  ++ DY+   Y  T+R VG    D ++
Sbjct: 259 ERNPKEGDYTAPIYEPTERVVGNNVDDKVK 288


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 533  GTWPSKRKRNMPT 571
            G WPS  K+N+PT
Sbjct: 1132 GQWPSWMKQNLPT 1144


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 557 RNMPTKLLRPPTKSRRKRPLPKQK 628
           R+  T L  PPTK +RK    KQ+
Sbjct: 206 RHGKTPLATPPTKEKRKPFFKKQE 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,653
Number of Sequences: 2352
Number of extensions: 9357
Number of successful extensions: 59
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -