Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00596
(544 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 163 2e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 155 5e-37
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 153 2e-36
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 140 2e-32
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 123 2e-27
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 121 9e-27
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 121 1e-26
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 116 5e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 113 2e-24
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 109 4e-23
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 103 3e-21
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 99 8e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 89 8e-17
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 4e-14
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 78 2e-13
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 77 2e-13
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 56 4e-07
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 40 0.028
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 40 0.028
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 40 0.028
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.049
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 39 0.065
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 38 0.15
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 38 0.20
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 37 0.35
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 37 0.35
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 37 0.35
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 37 0.35
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 35 1.1
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 4.3
UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;... 33 4.3
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 33 4.3
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 5.6
UniRef50_Q00YU6 Cluster: Chromosome 11 contig 1, DNA sequence; n... 33 5.6
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 33 5.6
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 7.4
UniRef50_A6SZY3 Cluster: Serine/threonine protein phosphatase; n... 32 7.4
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 7.4
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 32 9.8
UniRef50_A1SCD2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoar... 32 9.8
UniRef50_Q4N4M4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 9.8
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 163 bits (397), Expect = 2e-39
Identities = 84/133 (63%), Positives = 96/133 (72%), Gaps = 9/133 (6%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIP---DETGRPDKQ------RVRLLMSKGHSCYRPRRDGERKRK 325
+ G C W+ RI D+ G P KQ RVRLL+SKGHSCYRPRR GERKRK
Sbjct: 36 VSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRK 95
Query: 326 SVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDACTS 505
SVRGCIVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKED
Sbjct: 96 SVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQ 155
Query: 506 LVVKRVLPAKEGK 544
V++R LP KEGK
Sbjct: 156 YVIRRPLPEKEGK 168
Score = 120 bits (290), Expect = 2e-26
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 222 FPMKQGVLTN 251
FPMKQG++TN
Sbjct: 61 FPMKQGIMTN 70
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 155 bits (377), Expect = 5e-37
Identities = 82/112 (73%), Positives = 90/112 (80%), Gaps = 6/112 (5%)
Frame = +2
Query: 227 DETGRPDKQ------RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 388
D+ G P KQ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+K
Sbjct: 57 DKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
Query: 389 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAKEGK 544
G ++IPGLTD VPRRLGPKRAS+IRKLFNLSKED VV++ L KEGK
Sbjct: 117 GEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK 167
Score = 126 bits (303), Expect = 4e-28
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 222 FPMKQGVLTN 251
FPMKQGVLT+
Sbjct: 61 FPMKQGVLTH 70
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 153 bits (372), Expect = 2e-36
Identities = 77/112 (68%), Positives = 87/112 (77%), Gaps = 6/112 (5%)
Frame = +2
Query: 227 DETGRPDKQ------RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 388
D+ G P KQ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+K
Sbjct: 57 DKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKK 116
Query: 389 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAKEGK 544
G ++IPGLTD V RRLGPKRAS IRKL+NL+KED VVKR LP K+GK
Sbjct: 117 GEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK 168
Score = 132 bits (319), Expect = 5e-30
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 222 FPMKQGVLTNS 254
FPMKQGVLTN+
Sbjct: 61 FPMKQGVLTNT 71
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 140 bits (339), Expect = 2e-32
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 222 FPMKQGVLTN 251
FPMKQGVLT+
Sbjct: 61 FPMKQGVLTH 70
Score = 60.5 bits (140), Expect = 2e-08
Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Frame = +2
Query: 200 WRQRQARIP---DETGRPDKQRV----RL-LMSKGHSCYRPRRDGERKRKSVRGCIVDAN 355
W+ Q RI D+ G P KQ V RL L+ K HSC+ PR + RK K+VR V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 356 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 493
+S L LV+++K P RLGP R+S I K++ L +ED
Sbjct: 105 VSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEED 140
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 123 bits (297), Expect = 2e-27
Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Frame = +2
Query: 248 KQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 427
K RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NV
Sbjct: 70 KGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNV 129
Query: 428 PRRLGPKRASKIRKLFNLSKEDACTSL---VVKRVLPAKEGK 544
PRRLGPKR +K+R+LF K D + +++R K+GK
Sbjct: 130 PRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGK 171
Score = 105 bits (251), Expect = 9e-22
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 222 FPMKQGVL 245
FPM+QGVL
Sbjct: 61 FPMRQGVL 68
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 121 bits (292), Expect = 9e-27
Identities = 58/93 (62%), Positives = 69/93 (74%)
Frame = +2
Query: 227 DETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 406
D+ G K RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI
Sbjct: 68 DKQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIA 127
Query: 407 GLTDGNVPRRLGPKRASKIRKLFNLSKEDACTS 505
GLTD NVPRRLGPKR +K+R+LF K D S
Sbjct: 128 GLTDQNVPRRLGPKRLTKLRRLFGFKKADRVIS 160
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 121 bits (291), Expect = 1e-26
Identities = 59/97 (60%), Positives = 71/97 (73%)
Frame = +2
Query: 254 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 433
RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V +
Sbjct: 113 RVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGK 172
Query: 434 RLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAKEGK 544
+LGPKRA+KIRKLFNL K D V+ R + +K GK
Sbjct: 173 KLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-SKNGK 208
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 222 FPMKQGVLTNS 254
FPM QGVLTN+
Sbjct: 102 FPMMQGVLTNN 112
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 116 bits (278), Expect = 5e-25
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 222 FPMKQGVLTN 251
FPMKQ VLT+
Sbjct: 61 FPMKQDVLTH 70
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/44 (59%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +2
Query: 395 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE-DACTSLVVKRV 523
++IPGLTD PR +GPKRAS+IRKLFNLSKE DA + +++++
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKI 123
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 113 bits (273), Expect = 2e-24
Identities = 62/115 (53%), Positives = 76/115 (66%), Gaps = 9/115 (7%)
Frame = +2
Query: 227 DETGRPDKQ------RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 388
D+ G P KQ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+K
Sbjct: 57 DKDGFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKK 116
Query: 389 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED---ACTSLVVKRVLPAKEGK 544
G EI GLT +PR+LGPKRA+ I+KLF L KED V++R +GK
Sbjct: 117 GVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGK 171
Score = 103 bits (247), Expect = 3e-21
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 222 FPMKQGVL 245
FPMKQGV+
Sbjct: 61 FPMKQGVM 68
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 109 bits (262), Expect = 4e-23
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
Frame = +2
Query: 224 PDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 403
P + G +R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI
Sbjct: 62 PMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEI 121
Query: 404 PGLTDGNVPRRLGPKRASKIRKLFNL--SKEDACTSLVVKRVLPAK 535
GLT VPRR GPKRAS +R +F + SK DA ++ + V P K
Sbjct: 122 DGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKREVKPGK 167
Score = 82.6 bits (195), Expect = 5e-15
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 222 FPMKQGVLT 248
FPMKQGV+T
Sbjct: 61 FPMKQGVIT 69
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 103 bits (247), Expect = 3e-21
Identities = 49/99 (49%), Positives = 68/99 (68%)
Frame = +2
Query: 224 PDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 403
P TG RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEI 120
Query: 404 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDACTSLVVKR 520
G+T+ +P R GP+RAS RKLFNLS++D V++R
Sbjct: 121 EGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
Score = 88.2 bits (209), Expect = 1e-16
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +3
Query: 45 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 224
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 225 PMKQGVLTNS 254
PM GV TN+
Sbjct: 61 PMMTGVATNN 70
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 98.7 bits (235), Expect = 8e-20
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +2
Query: 251 QRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 430
QR RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP
Sbjct: 77 QRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVP 136
Query: 431 RRLGPKRASKIRKLFNL 481
+RL PKRASKIR+LF L
Sbjct: 137 KRLVPKRASKIRRLFGL 153
Score = 66.1 bits (154), Expect = 5e-10
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 45 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 224
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 225 PMKQGVL 245
PM QGVL
Sbjct: 68 PMYQGVL 74
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 88.6 bits (210), Expect = 8e-17
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +2
Query: 254 RVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 427
RV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G Q I G+TD
Sbjct: 73 RVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTA 132
Query: 428 PRRLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAKEGK 544
PRRLGPKRASKIRKLFNLS+ + VV+R + K GK
Sbjct: 133 PRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK 170
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 218
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 219 GFPMKQGVLTNS 254
GFPM GVL +S
Sbjct: 61 GFPMVPGVLASS 72
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 4e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 179
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 222 FPMKQGVLTNS 254
FPMK+G+L+ S
Sbjct: 61 FPMKEGILSPS 71
Score = 55.6 bits (128), Expect = 7e-07
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +2
Query: 206 QRQARIPDETGRPDKQRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVI 379
Q + P + G RV++L+ KG + R + GER RKSVRGCIV +SVL + +
Sbjct: 56 QDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKL 115
Query: 380 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 493
+ ++ +T+ N + L KR+S +RK+ L+K D
Sbjct: 116 LTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTD 152
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 77.4 bits (182), Expect = 2e-13
Identities = 42/104 (40%), Positives = 63/104 (60%)
Frame = +2
Query: 224 PDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 403
P +G K+RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI
Sbjct: 47 PMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEI 106
Query: 404 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAK 535
GLT+ P++ K+RK+F + E+ ++ +L ++
Sbjct: 107 DGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSE 150
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/55 (38%), Positives = 39/55 (70%)
Frame = +3
Query: 84 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 248
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLT 54
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 56.4 bits (130), Expect = 4e-07
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +2
Query: 254 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 433
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 434 RLGPKRASKIRKLFNLSKED 493
RLGP R+S I K++ L +ED
Sbjct: 68 RLGPVRSSNISKIYYLCEED 87
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.3 bits (90), Expect = 0.028
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGV 242
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDI 188
Score = 33.5 bits (73), Expect = 3.2
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 352
++GL R ++ P P + R L+S G + PR GER+RK+VRG +
Sbjct: 166 LKGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISE 224
Query: 353 NLSVLALVIVRK 388
++ + IV++
Sbjct: 225 DIVQINTKIVKQ 236
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 40.3 bits (90), Expect = 0.028
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 222 FPMKQGVLT 248
F +K+ + T
Sbjct: 60 FLLKKNLNT 68
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 40.3 bits (90), Expect = 0.028
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 132 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
++G E LG KGY LR+ GG+DK GFPMK+ V
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDV 64
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.049
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 36 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 215
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 216 QGFPMKQGV 242
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 39.1 bits (87), Expect = 0.065
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 242 PDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 391
P R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 68 PGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 37.9 bits (84), Expect = 0.15
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 239 RPD---KQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 382
RPD +RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 75 RPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
Score = 35.5 bits (78), Expect = 0.80
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +3
Query: 36 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 188
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 189 LRVAGGNDKQGFPMKQGV 242
L++ GG DK GFPM+ V
Sbjct: 61 LKITGGTDKDGFPMRPDV 78
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 37.5 bits (83), Expect = 0.20
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 239 RPD---KQRVRLLMSKGHSCYRPRRDGERKRKSVRG 337
RPD +RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 75 RPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
Score = 35.1 bits (77), Expect = 1.1
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Frame = +3
Query: 36 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 188
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 189 LRVAGGNDKQGFPMKQGV 242
L + GG DK GFPM+ +
Sbjct: 61 LEIRGGTDKDGFPMRPDI 78
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 36.7 bits (81), Expect = 0.35
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 RVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 430
RV LL++ HS Y+P R E S++ V +S+L +VI+ G ++IPG T P
Sbjct: 61 RVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWAP 119
Query: 431 RR 436
+R
Sbjct: 120 KR 121
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 36.7 bits (81), Expect = 0.35
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 329 LIYVFSLHRGAVCNMSGPLTSEDEHA-VCQDALFHRESLLVVAASDTKYIALPFI 168
L F+L + L E EH V Q AL H E+LLVV D + ++LPF+
Sbjct: 157 LASAFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 36.7 bits (81), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 36 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 215
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 216 QGFPMKQGV 242
G PM++ V
Sbjct: 59 AGRPMREDV 67
Score = 33.1 bits (72), Expect = 4.3
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 227 DETGRPDKQRV-----RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 391
D+ GRP ++ V ++ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 392 AQEIPGL 412
+ + L
Sbjct: 117 EEPVAEL 123
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 36.7 bits (81), Expect = 0.35
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 346
M GL R IP G P R ++L++ G + PR GER+RKSVRG ++
Sbjct: 153 MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 35.1 bits (77), Expect = 1.1
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 221
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 222 FPMKQGVLTNSV 257
+K V+ +V
Sbjct: 498 KNLKTQVIQENV 509
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 246 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 148
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;
n=1; Acidothermus cellulolyticus 11B|Rep:
Transcriptional regulator, MarR family - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 155
Score = 33.1 bits (72), Expect = 4.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 347 DANLSVLALVIVRKGAQEIPGLTDGNVP--RRLGPKRASKIRKLFNLSKEDACTSLVVKR 520
D + V+ + + R+GAQ + GLT +V RRL P A ++L + +E A S +R
Sbjct: 90 DRDARVVRVTLTRRGAQRLTGLTSQHVAEIRRLAPAFARLTKELAAMQEEHATDSPARRR 149
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 33.1 bits (72), Expect = 4.3
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 242 PDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 382
P + R+L+S G + PR GER+RK+VRG + ++ + VIV
Sbjct: 167 PGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 32.7 bits (71), Expect = 5.6
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Frame = +2
Query: 218 RIPDETG----RPDK--QRVRLLM--SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 373
R+P+E G RPD Q V+ + GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 374 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 472
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 320 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 490
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_Q00YU6 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
sequence - Ostreococcus tauri
Length = 379
Score = 32.7 bits (71), Expect = 5.6
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 320 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDAC 499
R R C + A+ +V A I R+GA +P PR +GP+R+++ + +S D C
Sbjct: 25 RALCRSCSLIASKTVAAEAI-RRGA--VPLANPSARPRTIGPERSAEANRSRAISTSDFC 81
Query: 500 TS 505
TS
Sbjct: 82 TS 83
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 135 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
+G+E +A LG E K +R+ GG+DK G PM+ V
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDV 71
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 7.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 42 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL 164
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_A6SZY3 Cluster: Serine/threonine protein phosphatase; n=2;
Oxalobacteraceae|Rep: Serine/threonine protein
phosphatase - Janthinobacterium sp. (strain Marseille)
(Minibacterium massiliensis)
Length = 268
Score = 32.3 bits (70), Expect = 7.4
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 422 NVPRRLGPKRASKIRKLFNLSKEDACTSLVVKRVLPAKEGK 544
N PR+ + RK SK D CT +VK V PAKE K
Sbjct: 217 NSPRKASEMLITNARKRAAGSKADNCTLAIVKLVKPAKEVK 257
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.3 bits (70), Expect = 7.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 93 VVDEHKLRIFYEKRMGAEVEADQLGDEW 176
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 32.3 bits (70), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSC 289
+ G C +CR R+ + +P + GRP+ R +S GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGR---CISSGHTC 41
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 31.9 bits (69), Expect = 9.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 120 FYEKRMGAEVEADQLGDEWKGYVLRVAG 203
F E+R AEVE+ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
>UniRef50_A1SCD2 Cluster: Putative uncharacterized protein; n=1;
Nocardioides sp. JS614|Rep: Putative uncharacterized
protein - Nocardioides sp. (strain BAA-499 / JS614)
Length = 617
Score = 31.9 bits (69), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 5 TSGTRFDGIDRSHEVKRFVPGNGMPEVVRSGGRAQASYLL 124
T G DG +R+ ++ R V NG P+V R GG + + +L
Sbjct: 215 TLGRLLDGFERTGQLPRKVDTNGTPDVHRCGGLVKVAGML 254
>UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoarcus
anaerobius|Rep: Putative regulatory protein - Azoarcus
anaerobius
Length = 661
Score = 31.9 bits (69), Expect = 9.8
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 266 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 445
++ GH YR R +R+ D ++ + L ++R +E G D V R+LG
Sbjct: 582 IIKPGHLAYRMRDRRTPERQHAAASSRDQSIPAIQLDLIRSAIEEFNGNVD-LVGRKLGL 640
Query: 446 KRASKIRKL 472
RA+ R++
Sbjct: 641 SRATVYRRM 649
>UniRef50_Q4N4M4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 342
Score = 31.9 bits (69), Expect = 9.8
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -3
Query: 326 IYVFSLHRGAVCNMSGPLTSEDEHAVCQDALFHRESLLVVAASDTKYIALPFI 168
I +F R VC S +EH + Q FH E + V + KY+ LP+I
Sbjct: 291 IVIFCKDRYFVCRRENGKRSREEHKLTQ---FHHEIINSVVKNIVKYLPLPYI 340
>UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 372
Score = 31.9 bits (69), Expect = 9.8
Identities = 26/69 (37%), Positives = 36/69 (52%)
Frame = -2
Query: 252 CLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 73
C+S P++ A R + RH++H+P + R P RRP A +E P RT+S
Sbjct: 211 CISHPPIA----ATRHQHRHDLHTP-LPRPKFTP--RRPRA--HSFEDNIHPLFRTSSPE 261
Query: 72 PLPGTKRLT 46
P PGT R T
Sbjct: 262 PPPGTTRGT 270
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,247,613
Number of Sequences: 1657284
Number of extensions: 12625980
Number of successful extensions: 35606
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 34451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35584
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -