Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00593
         (786 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)                  29   4.3  
SB_29128| Best HMM Match : Ank (HMM E-Value=2.9e-19)                   29   4.3  

>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
          Length = 2123

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 141 SKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
           S +   GH     YE  M QH  S C Y    D + Y
Sbjct: 887 SLWADQGHCKNVVYEDFMKQHCKSTCGYCACKDAIKY 923


>SB_29128| Best HMM Match : Ank (HMM E-Value=2.9e-19)
          Length = 454

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +1

Query: 520 LQILITGIVYSLELVQWSNV*QSYFYIQTCFILFYLKEISFDFHLALYI 666
           L++L TGI+Y L   +W+   +  FY +  F + YL      F LA+Y+
Sbjct: 364 LEMLNTGIMYRLLEEKWNAFAKRKFYTRMLFAVLYL----ICFSLAIYL 408


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,881,441
Number of Sequences: 59808
Number of extensions: 398357
Number of successful extensions: 715
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)