Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00592
(772 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 25 0.67
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 25 0.67
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 25 0.67
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 23 2.0
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 23 3.6
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 23 3.6
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 23 3.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 4.7
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 4.7
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 6.2
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 25.0 bits (52), Expect = 0.67
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 NLLEEK-GISNEFVQKLSDFSTAYEHTAYINLLESISKFTI 167
N+L+E I NE ++L + A H YI+++ I++FT+
Sbjct: 137 NILQEFIQIFNEETKRLVEDLEAESHKPYIDVVVPITQFTL 177
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.67
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 664 FNVKSILSRTNKVTFPLTALSTNIVCFIYFL 756
F V+ IL +TNK+ L +T F YFL
Sbjct: 162 FLVEHILVQTNKLVLALECNNTTAEGFTYFL 192
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.67
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 664 FNVKSILSRTNKVTFPLTALSTNIVCFIYFL 756
F V+ IL +TNK+ L +T F YFL
Sbjct: 162 FLVEHILVQTNKLVLALECNNTTAEGFTYFL 192
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 23.4 bits (48), Expect = 2.0
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 NLLEEK-GISNEFVQKLSDFSTAYEHTAYINLLESISKFTI 167
N+L+E I NE ++L + A H YI+++ I++FT+
Sbjct: 137 NILQEFIQIFNEETKRLVEDLEAECHKPYIDVVVPITQFTL 177
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
Y++++Y +L+ S L + N Y ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
Y++++Y +L+ S L + N Y ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
Y++++Y +L+ S L + N Y ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 464 LYKYIFTRTVFALILYVSLYLVTIVDRRLKINKC 363
LY+ T+T LI ++L+ + + ++L+ + C
Sbjct: 314 LYRIPVTKTDSMLIRNINLFSLQLAHQKLEFSAC 347
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 464 LYKYIFTRTVFALILYVSLYLVTIVDRRLKINKC 363
LY+ T+T LI ++L+ + + ++L+ + C
Sbjct: 139 LYRIPVTKTDSMLIRNINLFSLQLAHQKLEFSAC 172
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 238 VSNYIILFASSVQLKFRKSNCYRSNNST 321
V+ Y+++F Q ++N +NNST
Sbjct: 374 VTTYLVIFIQFDQSSNSRNNYVLTNNST 401
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,975
Number of Sequences: 336
Number of extensions: 3699
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -