Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00592
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical pr...    40   0.002
U42844-4|ABM01868.1|  739|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    29   3.7  

>Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical
           protein F59A2.3 protein.
          Length = 236

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 54  LEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           LEE+G+   F + L  ++T YEH+ Y+ LL+ I KF
Sbjct: 198 LEERGLDARFCKTLVAYATHYEHSQYVGLLDKIKKF 233


>U42844-4|ABM01868.1|  739|Caenorhabditis elegans Hypothetical
           protein C08A9.3 protein.
          Length = 739

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 664 FNVKSILSRTNKVTFPLTALSTNI-VCFIYFLE 759
           FNV S+     K+ F LTA+S+ +  C+ YF E
Sbjct: 523 FNVNSVSRWVVKILFSLTAISSTVYFCYQYFYE 555


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 672 NIKSCLKYVFLLV-SDRSNLLLCSFYVTNDRKY*IMFWRFVTLL 544
           N+  C+   F+ + S  +NLLLCS Y  +D    I   +F T++
Sbjct: 612 NLSDCVLLTFVCIPSAFANLLLCSLYCPSDVLQQISLQQFFTII 655


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,907,581
Number of Sequences: 27780
Number of extensions: 318542
Number of successful extensions: 711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)