Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00591
         (382 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-...    39   0.036
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    37   0.15 
UniRef50_Q17GC2 Cluster: Putative uncharacterized protein; n=2; ...    34   0.78 
UniRef50_Q5A6M5 Cluster: Putative uncharacterized protein; n=1; ...    34   0.78 
UniRef50_Q4N3Y1 Cluster: Putative uncharacterized protein; n=1; ...    32   3.2  
UniRef50_Q6AXJ5 Cluster: Zgc:101037; n=2; Danio rerio|Rep: Zgc:1...    31   5.5  
UniRef50_A2ZD71 Cluster: Putative uncharacterized protein; n=2; ...    31   5.5  
UniRef50_UPI000023E47E Cluster: hypothetical protein FG05604.1; ...    31   7.3  
UniRef50_Q89B74 Cluster: Bll8291 protein; n=1; Bradyrhizobium ja...    31   7.3  
UniRef50_Q5D9I1 Cluster: SJCHGC09170 protein; n=2; Schistosoma j...    31   7.3  
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther...    31   7.3  
UniRef50_Q0U2B6 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   7.3  

>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
           transcriptase-like protein; n=9; cellular organisms|Rep:
           Endonuclease and reverse transcriptase-like protein -
           Bombyx mori (Silk moth)
          Length = 960

 Score = 38.7 bits (86), Expect = 0.036
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +2

Query: 62  RRRPKHVITDPPDPLTVLLGTTST 133
           RRRP+HV+TDP DP+T+ L T S+
Sbjct: 913 RRRPRHVLTDPSDPITLALDTFSS 936


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 36.7 bits (81), Expect = 0.15
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +2

Query: 62  RRRPKHVITDPPDPLTVLLGTTSTGH 139
           RR P HV++DP D L+VLL  +STG+
Sbjct: 34  RRHPNHVLSDPRDSLSVLLDLSSTGY 59


>UniRef50_Q17GC2 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 489

 Score = 34.3 bits (75), Expect = 0.78
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 94  SRSINGAFRYHKHRSPSS-PNPSLATKGSTSELT 192
           S  +NG FR+H+HR PS+   P+ +T  +T+  T
Sbjct: 342 SNEVNGEFRHHRHRRPSTEATPTTSTTSTTTTTT 375


>UniRef50_Q5A6M5 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 795

 Score = 34.3 bits (75), Expect = 0.78
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 58  SSTSPKT-RHYGSSRSINGAFRYHKHRSPSSPNPSLAT 168
           SSTS  T ++Y +SR+ + A R H  RSP +P PS  T
Sbjct: 431 SSTSRNTSQNYTTSRTPSAASRMHSARSPGNPQPSTQT 468


>UniRef50_Q4N3Y1 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 242

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 325 SSPGSNRSVANTDPNKSSASQNLPRIGHATH 233
           ++P +N   A  DP+ +SA+  LP  GH  H
Sbjct: 191 TNPNANTGSATVDPSNASATGGLPSTGHTVH 221


>UniRef50_Q6AXJ5 Cluster: Zgc:101037; n=2; Danio rerio|Rep:
           Zgc:101037 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 465

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 34  VTSVLLMNSSTSPKT--RHYGSSRSINGAFRYHKHRSPSSPNPSLATKGSTSEL 189
           V SVL M    +P+   R     +S +   R H HR PSSP+ S +T GS SEL
Sbjct: 270 VQSVLHMMKHRNPRLCERVSALQKSSSEKQRTH-HRPPSSPSRSASTLGSLSEL 322


>UniRef50_A2ZD71 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 461

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +1

Query: 1   RHEDARMLRF*VTSVLLMNSSTSPKTRHYGSSRSINGAFRYHKHRSPSSPNPS--LATKG 174
           R      +RF  T   L +SS+S  TR  GSSR+++ +    +   P++  P+    T+G
Sbjct: 48  RRTTTATVRFAPTPTTLSSSSSSSATRRAGSSRAVSSSSSSSQQARPATARPASVAGTRG 107

Query: 175 STS 183
             S
Sbjct: 108 MRS 110


>UniRef50_UPI000023E47E Cluster: hypothetical protein FG05604.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05604.1 - Gibberella zeae PH-1
          Length = 397

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 55  NSSTSPKTRHYGSSRSINGAFRYHKHRSPSSPNP 156
           NS+T     +  SSR +NG++R  K  +PS P+P
Sbjct: 89  NSTTGATKPNVLSSRPMNGSYRVSKPAAPSRPSP 122


>UniRef50_Q89B74 Cluster: Bll8291 protein; n=1; Bradyrhizobium
           japonicum|Rep: Bll8291 protein - Bradyrhizobium
           japonicum
          Length = 209

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 55  NSSTSPKTRHYGSSRSINGAFRYHKHRSPSSPNPSLATKGS 177
           +SST P T H       +G  R  +  SPSS  PSL T  S
Sbjct: 168 SSSTWPSTMHRAWPSPRSGGIRKRRAPSPSSRRPSLTTAAS 208


>UniRef50_Q5D9I1 Cluster: SJCHGC09170 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC09170 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 310

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -1

Query: 325 SSPGSNRSVANTDPNKSSASQNLPRIGHATH*EDPTRNSVSCVCRLIR 182
           SS   +     +DP +   SQN  R  H++H   P  N  +  C+ +R
Sbjct: 55  SSEKGSSGYGCSDPKRPRISQNTKRRNHSSHVSLPISNHTTSTCKAVR 102


>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
           mylitta|Rep: Reverse transcriptase-like - Antheraea
           mylitta (Tasar silkworm)
          Length = 186

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 62  RRRPKHVITDPPDPLTVL 115
           RRRP+H+  DPPD +T +
Sbjct: 122 RRRPRHIFIDPPDEITAV 139


>UniRef50_Q0U2B6 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 316

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 123 PQAPVTVLAEPVACDEGLDERINLQTQLTEFLVGSSQW 236
           P AP T  + PV  DEG+D   ++  Q  E +    QW
Sbjct: 247 PSAPATCRSSPVEGDEGIDMEYDVPPQDVEPMADMPQW 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,243,357
Number of Sequences: 1657284
Number of extensions: 5633913
Number of successful extensions: 15046
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15039
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)