Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00591
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4 p...    21   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   7.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   9.6  

>AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4
           protein.
          Length = 23

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 102 GSGGSVMTCFGRRRRI 55
           G GG   T  GRRRR+
Sbjct: 7   GDGGRPETSSGRRRRL 22


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 325 SSPGSNRSVANTDPNKSSASQNLPRI 248
           S+  + ++  N + +KSS S N P+I
Sbjct: 175 STSSTEKAGTNNNNSKSSQSSNPPQI 200


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -1

Query: 289 DPNKSSASQ-NLPRIGHATH*EDPTRNSVS 203
           D +K S S    PR    TH   P RNS S
Sbjct: 907 DEDKPSVSPLTSPRQPAETHAGSPCRNSAS 936


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 131 CLWYLKAPLMDRED 90
           C WY+   L  R+D
Sbjct: 460 CFWYVPKSLRGRKD 473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,733
Number of Sequences: 336
Number of extensions: 1196
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)