Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00591
         (382 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   1.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   2.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   6.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   6.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   8.7  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +1

Query: 91  SSRSINGAFRYHKHRSPSSPNPSLATKGSTSELT 192
           + R +  + + H+H+S + P P+ +T G++   T
Sbjct: 779 AERELIMSVQRHQHQSLAYPRPARSTTGASERFT 812


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 4   HEDARMLRF*V-TSVLLMNSSTSPKTRHYGSSRSINGAFR 120
           + D R + + V T V ++N  +SP+ RH G  R  +  ++
Sbjct: 198 YSDHRYITYTVGTIVPVVNEPSSPRMRHQGRIRHADRRYK 237


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 136  SPSSPNPSLATKGSTSELTYRH 201
            SP+SP PS  +K   S    RH
Sbjct: 1462 SPASPTPSKKSKRHQSASPIRH 1483


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 82  HYGSSRSINGAFRYHKHRSPSSPNPSLATKGSTSE 186
           H     S +G FR H HR    P+P     G  ++
Sbjct: 893 HMSQFLSGHGFFRSHLHRMGYVPSPVCPACGDENQ 927


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 266  AESTPDRTRDPLRRSDEKLSELC 198
            ++S PDRT       ++ L ELC
Sbjct: 1036 SDSGPDRTEPDTLLDEQCLEELC 1058


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,250
Number of Sequences: 2352
Number of extensions: 5859
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)