Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00590
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.2
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 2.2
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 22 3.8
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 5.0
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 21 6.6
EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport pe... 21 6.6
EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport pe... 21 6.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 6.6
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 161 CTFGCCTLPRSIQVQDKEGALHCSRSSTQANCLLWKESNS*SWKC 295
C+ GC +L R + DK + STQA + + W C
Sbjct: 540 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWLC 584
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 161 CTFGCCTLPRSIQVQDKEGALHCSRSSTQANCLLWKESNS*SWKC 295
C+ GC +L R + DK + STQA + + W C
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWLC 817
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 161 CTFGCCTLPRSIQVQDKEGALHCSRSSTQANCLLWKESNS*SWKC 295
C+ GC +L R + DK + STQA + + W C
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWLC 817
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 2.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 408 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDVLTNL 527
H+P A + LP+GA L ++ G+V +A G L L
Sbjct: 35 HSPCATGSN-GLPAGAGSNLLCASNGLVTTLASGSSLNGL 73
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 22.2 bits (45), Expect = 3.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 285 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 395
VG + EG L E +GD G+L AS +FA
Sbjct: 91 VGTALTFCLQEEGGTTSQLIELLGDAGKLL-ASVHFA 126
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -2
Query: 236 FGSNEELLPCLELVWIAEVYNSQRCT-STRVMDY 138
FG+ L +L+W EV N R + DY
Sbjct: 180 FGARHGLETLNQLIWFDEVVNELRILHGVEIRDY 213
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 196 TSSRQGRSSSLLPKLYTGQLF 258
TSS GRS + LP +T + F
Sbjct: 28 TSSPAGRSPAFLPHHFTKRSF 48
>EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport
peptide isoform B protein.
Length = 120
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 196 TSSRQGRSSSLLPKLYTGQLF 258
TSS GRS + LP +T + F
Sbjct: 28 TSSPAGRSPAFLPHHFTKRSF 48
>EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport
peptide isoform A protein.
Length = 140
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 196 TSSRQGRSSSLLPKLYTGQLF 258
TSS GRS + LP +T + F
Sbjct: 28 TSSPAGRSPAFLPHHFTKRSF 48
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 6.6
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +2
Query: 383 WKLRHCDWTQS 415
W HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 463 TFLAPDGSFTLVR 425
T PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 161 CTFGCCTLPRSIQVQDKEGALHCSRSSTQANCLLWKESNS*SW 289
C+ GC +L R + DK + STQA + + W
Sbjct: 226 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRW 268
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 641 DGYHHREDALQGSWQHHVHMASS 573
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 641 DGYHHREDALQGSWQHHVHMASS 573
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 641 DGYHHREDALQGSWQHHVHMASS 573
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 641 DGYHHREDALQGSWQHHVHMASS 573
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,169
Number of Sequences: 336
Number of extensions: 3995
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -