Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00590
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   281   1e-77
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    27   0.68 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   0.89 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.7  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   3.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   3.6  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    24   4.8  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  281 bits (690), Expect = 1e-77
 Identities = 129/168 (76%), Positives = 148/168 (88%), Gaps = 1/168 (0%)
 Frame = +3

Query: 9   VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
           +RAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FR
Sbjct: 5   IRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFR 64

Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
           DPY+F+  K+LFIA E ++    VYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG
Sbjct: 65  DPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRG 124

Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
           +LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGG
Sbjct: 125 KLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGG 172



 Score =  106 bits (254), Expect = 7e-25
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +2

Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGTHQH 646
           GRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGG HQH
Sbjct: 173 GRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQH 218


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 473 KQQRHGRYCCWRG 511
           +QQ+HG++CC RG
Sbjct: 280 QQQQHGQHCCCRG 292


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 608 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQYVPSSNNT 492
           GS  H     SSYV    CG P ++    C++ P+S +T
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH-PASRST 541


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 105 RHGYIKGVVKDIIHDP 152
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 105 RHGYIKGVVKDIIHDP 152
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 288 QLQELLSFHNKQLACVELRE 229
           +L E++  H K L CVEL E
Sbjct: 241 ELIEIIVMHQKALKCVELLE 260


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -2

Query: 320 LRHSSNRHHISNFKSCFLSTINNWPV*SFGSNEELLP 210
           L HS    H +NF     S  N WP   FG+    LP
Sbjct: 48  LPHSQYGAHSANF-----SAQNGWPTDGFGTTHTQLP 79


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 170 GCCTLPRSIQVQDKEGALHCSRSSTQ 247
           GCC LP +   Q K+ + + +  +T+
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNRTTE 41


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 231 PEALHRPIVYCGKKATLEVGNVMPVGAMPE 320
           P A ++ I+Y  + A L+V  V    AMPE
Sbjct: 190 PSAPNQQIIYKEQTANLQVQKVPAFQAMPE 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,457
Number of Sequences: 2352
Number of extensions: 17967
Number of successful extensions: 43
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)