Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00587
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M32659-1|AAA28896.1|  924|Drosophila melanogaster protein ( D.me...    29   8.6  
AE014298-1050|AAF46265.4| 1268|Drosophila melanogaster CG12690-P...    29   8.6  
AE014297-811|AAF54284.1|  494|Drosophila melanogaster CG11768-PA...    29   8.6  

>M32659-1|AAA28896.1|  924|Drosophila melanogaster protein (
           D.melanogaster Shab11protein mRNA, complete cds. ).
          Length = 924

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 239 VTSATLTQFSVVKILLSSSCELKWLFFSG*TSVLDL 346
           V +  +T F++  IL  SS   KW FF G  +++DL
Sbjct: 477 VEAVCITWFTLEYILRFSSSPDKWKFFKGGLNIIDL 512


>AE014298-1050|AAF46265.4| 1268|Drosophila melanogaster CG12690-PA
           protein.
          Length = 1268

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 631 SQPTTSGASSSQTTLNRSNEIYVRQ 705
           S PTTS +SSS TT +  ++ Y+R+
Sbjct: 382 SSPTTSSSSSSNTTTHHPHKKYLRE 406


>AE014297-811|AAF54284.1|  494|Drosophila melanogaster CG11768-PA
           protein.
          Length = 494

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 625 FDSQPTTSGASSSQTTLNRSNEIYVRQS 708
           FD+  TT+ A+++  +L RSN I +RQ+
Sbjct: 254 FDNPTTTAAAAAAVESLRRSNSILLRQN 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,522,190
Number of Sequences: 53049
Number of extensions: 638120
Number of successful extensions: 1255
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)