Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00583
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    46   0.001
UniRef50_UPI0000DD85B4 Cluster: PREDICTED: hypothetical protein;...    43   0.009
UniRef50_O97278 Cluster: Transporter, putative; n=2; Plasmodium|...    33   7.7  

>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 688 RELLVDPASSICLSQRLSHACLS 756
           R  LVDPASSICLSQRLSHACLS
Sbjct: 420 RGYLVDPASSICLSQRLSHACLS 442


>UniRef50_UPI0000DD85B4 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 236

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 748 MHGLIFETSIYYWQDQPG 695
           MHGLIFETSI YWQDQPG
Sbjct: 1   MHGLIFETSICYWQDQPG 18


>UniRef50_O97278 Cluster: Transporter, putative; n=2;
           Plasmodium|Rep: Transporter, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 3133

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 429 CFYLNIICFNVNGLCEISVDRFCIIILSLKIKFSRIWIFIYLMILF 566
           C ++  ICF++N   +I+++ F   +   K  +   W+  Y +ILF
Sbjct: 587 CLFIVNICFDINKERKINIENFLCCLKINKYYYYYSWLLFYFIILF 632


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,774,727
Number of Sequences: 1657284
Number of extensions: 10820418
Number of successful extensions: 19721
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19720
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)