BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00581 (753 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 28 1.2 SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 26 6.6 SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 25 8.8 >SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 319 Score = 28.3 bits (60), Expect = 1.2 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 223 IVQSLHSIETTNHLYFTKEPLGFFA 149 + Q++H++ NH YFTK P F + Sbjct: 192 LYQAIHNLSKFNHRYFTKYPTVFLS 216 >SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 716 Score = 25.8 bits (54), Expect = 6.6 Identities = 11/42 (26%), Positives = 25/42 (59%) Frame = -3 Query: 262 MEIHRGCRLLS*NIVQSLHSIETTNHLYFTKEPLGFFAILVD 137 + +HR L+S N+ +++ ++ + F K PL + A+++D Sbjct: 628 LHLHRFHELVSENLAKAVEYLQKSMQPQFDKSPLFWNALILD 669 >SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 421 Score = 25.4 bits (53), Expect = 8.8 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -1 Query: 300 VTTHSTLSGQSSLWKY 253 VTTH Q SLWKY Sbjct: 351 VTTHGFAKNQVSLWKY 366 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,005,531 Number of Sequences: 5004 Number of extensions: 59177 Number of successful extensions: 109 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 109 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 359287726 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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