Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00580
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    29   0.054
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    29   0.054
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 0.054
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 732 FWYMYIWCPFHVQLLHQWILEHP*HTLHTFQVLLFHVLYAVLL 604
           F Y+ ++    V L + WI E    TL  + + LF VLY VLL
Sbjct: 140 FVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLL 182


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 0.054
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 732 FWYMYIWCPFHVQLLHQWILEHP*HTLHTFQVLLFHVLYAVLL 604
           F Y+ ++    V L + WI E    TL  + + LF VLY VLL
Sbjct: 140 FVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLL 182


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 313 LNLLFSECNPVRSQWAKSDNAVV 245
           +NL+F+ C  V S W +  + ++
Sbjct: 64  VNLIFNTCGEVFSAWVRCQDQIL 86


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -1

Query: 654 LHTFQVLLFHVLYAVLLMDFV*YSSLHQYGTASVGVRAYPQLAYNHIQH 508
           + TF +L F V + ++  DFV   +LH+          Y  +  + I H
Sbjct: 1   MKTFVILFFGVFF-IIFSDFVNGKTLHRSTRDDKYTTRYDNVDVDRILH 48


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/28 (25%), Positives = 12/28 (42%)
 Frame = +1

Query: 214 RHCIFNMRFCEQLHCHFSPIASEPDYIL 297
           R C +  ++C  L  H       P+ +L
Sbjct: 290 RDCSYATKYCHSLKIHLRRYGHTPNVVL 317


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 598 IHQKHSVKNMKKQHLKSM 651
           +HQ+H  +NM  + L +M
Sbjct: 313 MHQQHHQQNMSHEELSAM 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,072
Number of Sequences: 336
Number of extensions: 3984
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)