Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00580
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    28   0.27 
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    25   3.4  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    25   3.4  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   3.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   7.8  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 10/47 (21%), Positives = 27/47 (57%)
 Frame = +3

Query: 492 SHSENNAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEK 632
           ++S ++  +  +P+ GML  Q +Q R    ++++    + QR++ ++
Sbjct: 55  NNSSSSGTHSDRPVAGMLQQQQQQQRQPQRQAVVGTQQQQQRRQQQQ 101


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 406 QHVQRLHFHPQLLYELQQL*IHQCEHQDLSW 314
           +H   + F+  + YE+ +   H CE+ D +W
Sbjct: 65  KHNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 679 PLVKQLDVKWTPDVHIP 729
           PL K L +  TP+ HIP
Sbjct: 4   PLTKSLQLSTTPEYHIP 20


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 543 AYPQLAYNHIQHYFLNGFSD 484
           +YP   Y+H Q+Y++  +S+
Sbjct: 130 SYPHSHYSHNQYYYMQNYSN 149


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 741 SSVFWYMYIWCPFHVQLLHQWILEHP*HTLHTFQVLLF 628
           ++ FW+M +W  +      +   E   H LH  + L F
Sbjct: 156 ATFFWFMPVWTTYSAYFAVRNSTEPVEHVLHLEEELYF 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,112
Number of Sequences: 2352
Number of extensions: 16099
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)