Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00580
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 85 6e-17
At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 85 6e-17
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 35 0.051
At5g58890.1 68418.m07378 MADS-box family protein various predict... 31 0.63
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 31 0.63
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 31 0.63
At5g28650.1 68418.m03508 WRKY family transcription factor DNA-bi... 29 2.6
At3g04670.1 68416.m00500 WRKY family transcription factor simila... 29 2.6
At3g06350.1 68416.m00733 dehydroquinate dehydratase, putative / ... 29 4.5
At1g65620.1 68414.m07443 LOB domain protein 6 / lateral organ bo... 28 7.8
>At3g51800.2 68416.m05681 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 401
Score = 84.6 bits (200), Expect = 6e-17
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +2
Query: 11 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 190
EKE+ T E VVTKYK A +IVN+ L+ V+A+C P A +ICE GD + E+T ++
Sbjct: 9 EKELSLTSPE--VVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQTASMY 66
Query: 191 KKEKDS-KKGIAFSTCVSVNNCIVTFRPLRAN 283
K K ++G+AF TC+SVNN + F PL ++
Sbjct: 67 KNSKKKIERGVAFPTCISVNNTVGHFSPLASD 98
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +1
Query: 259 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADVXXXXXXXX 438
HFSP+AS+ + +L+ GD+ KID+G HIDGFIA+V HT V+ E +SGR ADV
Sbjct: 91 HFSPLASD-ESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAA 149
Query: 439 XXXXXXXKPGTENYAVTEAIQKI 507
+PG +N VTEAIQK+
Sbjct: 150 DVALRLVRPGKKNTDVTEAIQKV 172
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 510 AEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGE 689
A Y CK +EG+LSHQLKQ IDG K ++ S ++ E+ EVYA+D++ STG+
Sbjct: 174 AAYDCKIVEGVLSHQLKQHVIDGNKVVLSVSS--PETTVDEVEFEENEVYAIDIVASTGD 231
Query: 690 AVGREMDTRCT 722
+ +D + T
Sbjct: 232 GKPKLLDEKQT 242
>At3g51800.1 68416.m05680 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 392
Score = 84.6 bits (200), Expect = 6e-17
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +2
Query: 11 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 190
EKE+ T E VVTKYK A +IVN+ L+ V+A+C P A +ICE GD + E+T ++
Sbjct: 9 EKELSLTSPE--VVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQTASMY 66
Query: 191 KKEKDS-KKGIAFSTCVSVNNCIVTFRPLRAN 283
K K ++G+AF TC+SVNN + F PL ++
Sbjct: 67 KNSKKKIERGVAFPTCISVNNTVGHFSPLASD 98
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +1
Query: 259 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADVXXXXXXXX 438
HFSP+AS+ + +L+ GD+ KID+G HIDGFIA+V HT V+ E +SGR ADV
Sbjct: 91 HFSPLASD-ESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAA 149
Query: 439 XXXXXXXKPGTENYAVTEAIQKI 507
+PG +N VTEAIQK+
Sbjct: 150 DVALRLVRPGKKNTDVTEAIQKV 172
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 510 AEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGE 689
A Y CK +EG+LSHQLKQ IDG K ++ S ++ E+ EVYA+D++ STG+
Sbjct: 174 AAYDCKIVEGVLSHQLKQHVIDGNKVVLSVSS--PETTVDEVEFEENEVYAIDIVASTGD 231
Query: 690 AVGREMDTRCT 722
+ +D + T
Sbjct: 232 GKPKLLDEKQT 242
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 35.1 bits (77), Expect = 0.051
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 504 NNAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLIST 683
N Y K I + H + +++I EKS+ P+ + E+ +E+ E+YA++ ST
Sbjct: 279 NGKVYQVKSIRNLNGHSIGRYQIHAEKSV---PNV---RGGEQTKMEEGELYAIETFGST 332
Query: 684 GEAVGREMDTRCTYTKK 734
G+ RE D C++ K
Sbjct: 333 GKGYVRE-DLECSHYMK 348
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 259 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 372
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 194 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIVDSAFTV 230
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +2
Query: 5 TSEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 184
TSE++ E + + + A ++ +V + + + P ++CE LE T +
Sbjct: 114 TSEEKREMERLQKPIYNSLRQAAEVHRQVRKYMRSILKPGMLMIDLCE-----TLENTVR 168
Query: 185 VFKKEKDSKKGIAFSTCVSVNNCIVTFRP 271
E + GIAF T S+NN + P
Sbjct: 169 KLISENGLQAGIAFPTGCSLNNVAAHWTP 197
>At5g58890.1 68418.m07378 MADS-box family protein various predicted
proteins, Oryza sativa and Arabidopsis thaliana
Length = 294
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 188 FKKEKDS--KKGIAFSTCVSVNNCIVTFRPLRANRITF*KKEI*PR 319
+KK K S KK FST V C++ + P +A + + EI P+
Sbjct: 21 YKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPK 66
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 259 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 372
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 192 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIIDCAFTV 228
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 504 NNAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLIST 683
N + K I + H + ++I KS+ P K E+ +E+ E YA++ ST
Sbjct: 277 NGKVFQVKSIRNLNGHSIGPYQIHAGKSV---PIV---KGGEQTKMEEGEFYAIETFGST 330
Query: 684 GEAVGREMDTRCTYTKK 734
G+ RE D C++ K
Sbjct: 331 GKGYVRE-DLECSHYMK 346
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 259 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 372
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 192 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIIDCAFTV 228
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 504 NNAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLIST 683
N + K I + H + ++I KS+ P K E+ +E+ E YA++ ST
Sbjct: 277 NGKVFQVKSIRNLNGHSIGPYQIHAGKSV---PIV---KGGEQTKMEEGEFYAIETFGST 330
Query: 684 GEAVGREMDTRCTYTKK 734
G+ RE D C++ K
Sbjct: 331 GKGYVRE-DLECSHYMK 346
>At5g28650.1 68418.m03508 WRKY family transcription factor
DNA-binding protein WRKY3, parsley, PIR:S72445
Length = 330
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 287 SGSLAMGEK*QCSCSQKRMLKMQ 219
SGSL G K +C CS+KR L+++
Sbjct: 223 SGSLKCGSKSKCHCSKKRKLRVK 245
>At3g04670.1 68416.m00500 WRKY family transcription factor similar
to elicitor response element binding protein WRKY3
isolog GB:AAB63078 [Arabidopsis thaliana]
Length = 330
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 296 RM*SGSLAMGEK*QCSCSQKRMLKMQ 219
+M SGSL G + +C CS+KR L+++
Sbjct: 220 KMCSGSLKCGSRSKCHCSKKRKLRVK 245
>At3g06350.1 68416.m00733 dehydroquinate dehydratase, putative /
shikimate dehydrogenase, putative similar to
dehydroquinate dehydratase/shikimate dehydrogenase
[Nicotiana tabacum][GI:535771], dehydroquinate
dehydratase/shikimate:NADP oxidoreductase [Lycopersicon
esculentum][GI:3169883]
Length = 603
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 262 SDNAVVHRNAC*KCNAFLGVF--LLFENLVSLLQYKFIAKFTYFSC 131
S + +VH A K F GV+ LL +NLVS LQ + F FSC
Sbjct: 336 SKSPIVHNQAF-KSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSC 380
>At1g65620.1 68414.m07443 LOB domain protein 6 / lateral organ
boundaries domain protein 6 (LBD6) / asymmetric leaves2
(AS2) identical to SP|O04479 LOB domain protein 6
(ASYMMETRIC LEAVES2) {Arabidopsis thaliana}
Length = 199
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 516 YGCKPIEGMLSHQLKQFRID 575
YGC + +L HQL+Q +ID
Sbjct: 82 YGCVGVISLLQHQLRQLQID 101
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,548,122
Number of Sequences: 28952
Number of extensions: 342159
Number of successful extensions: 1140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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