Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00578
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86322-1|BAA22590.1|  610|Homo sapiens calmegin protein.               32   2.6  
BC028357-1|AAH28357.1|  610|Homo sapiens calmegin protein.             32   2.6  
BC034225-1|AAH34225.1|  872|Homo sapiens DNAH2 protein protein.        31   6.0  
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.     31   6.0  
AC004780-1|AAC17932.1|  528|Homo sapiens F17127_1 protein.             30   8.0  

>D86322-1|BAA22590.1|  610|Homo sapiens calmegin protein.
          Length = 610

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 420 REKEAGFEKPLPSEAPEDQTEGSLEEGREDVDP-ELYVAQIFGMYGDAASMTMNLTGFNK 596
           +E++A  EKP+  E  + Q +G + E  E+ +P E    +I  + G   S   N +G   
Sbjct: 524 KEEKAALEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEIIEGQEESNQSNKSGSED 583

Query: 597 MLEELD 614
            ++E D
Sbjct: 584 EMKEAD 589


>BC028357-1|AAH28357.1|  610|Homo sapiens calmegin protein.
          Length = 610

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 420 REKEAGFEKPLPSEAPEDQTEGSLEEGREDVDP-ELYVAQIFGMYGDAASMTMNLTGFNK 596
           +E++A  EKP+  E  + Q +G + E  E+ +P E    +I  + G   S   N +G   
Sbjct: 524 KEEKAALEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEIIEGQEESNQSNKSGSED 583

Query: 597 MLEELD 614
            ++E D
Sbjct: 584 EMKEAD 589


>BC034225-1|AAH34225.1|  872|Homo sapiens DNAH2 protein protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 429 EAGFEKPLPSEAPEDQTEGSLEEGREDVDPELYVAQIF 542
           E   +  LP E PE + EG   +  E V+PE  V  +F
Sbjct: 43  EPELQAELPKEEPEPRLEGPQAQSEESVEPEADVKPLF 80


>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
          Length = 4464

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 429 EAGFEKPLPSEAPEDQTEGSLEEGREDVDPELYVAQIF 542
           E   +  LP E PE + EG   +  E V+PE  V  +F
Sbjct: 80  EPELQAELPKEEPEPRLEGPQAQSEESVEPEADVKPLF 117


>AC004780-1|AAC17932.1|  528|Homo sapiens F17127_1 protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 360 WSIGIRTEARDHGPHVPRIRREKEAGFEKPLPSEAPEDQTEGSLEEGRE 506
           W +G + ++  H P  PR  +  E   +   PS + E  +    +EG E
Sbjct: 323 WDLGCKCKSNSHSPQTPRFLQTAEM-VKPSTPSPSHESSSSSGSDEGTE 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,413,237
Number of Sequences: 237096
Number of extensions: 2076832
Number of successful extensions: 13039
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13039
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)