Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00576
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro...   146   3e-35
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro...   146   3e-35
AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p pro...   146   3e-35
AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB...   146   3e-35
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA...   146   3e-35

>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
          Length = 1227

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +1

Query: 256  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 435
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 436  EQFNSLDPGKQKAIAGDLERTPAEDQKNLK 525
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  135 bits (326), Expect = 5e-32
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 5    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 184
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 185  HVGETVTSLQRATLIPGGSEA 247
            HVGE + SLQ+ATLIPGGSEA
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEA 1126


>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
          Length = 1227

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +1

Query: 256  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 435
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 436  EQFNSLDPGKQKAIAGDLERTPAEDQKNLK 525
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  135 bits (326), Expect = 5e-32
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 5    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 184
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 185  HVGETVTSLQRATLIPGGSEA 247
            HVGE + SLQ+ATLIPGGSEA
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEA 1126


>AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p
           protein.
          Length = 688

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +1

Query: 256 ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 435
           AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 591 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 650

Query: 436 EQFNSLDPGKQKAIAGDLERTPAEDQKNLK 525
           EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 651 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 680



 Score =  135 bits (326), Expect = 5e-32
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 5   TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 184
           T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 507 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 566

Query: 185 HVGETVTSLQRATLIPGGSEA 247
           HVGE + SLQ+ATLIPGGSEA
Sbjct: 567 HVGEIIMSLQKATLIPGGSEA 587


>AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB,
           isoform B protein.
          Length = 688

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +1

Query: 256 ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 435
           AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 591 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 650

Query: 436 EQFNSLDPGKQKAIAGDLERTPAEDQKNLK 525
           EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 651 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 680



 Score =  135 bits (326), Expect = 5e-32
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 5   TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 184
           T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 507 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 566

Query: 185 HVGETVTSLQRATLIPGGSEA 247
           HVGE + SLQ+ATLIPGGSEA
Sbjct: 567 HVGEIIMSLQKATLIPGGSEA 587


>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
            isoform A protein.
          Length = 1227

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +1

Query: 256  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 435
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 436  EQFNSLDPGKQKAIAGDLERTPAEDQKNLK 525
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  135 bits (326), Expect = 5e-32
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 5    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 184
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 185  HVGETVTSLQRATLIPGGSEA 247
            HVGE + SLQ+ATLIPGGSEA
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEA 1126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,235,933
Number of Sequences: 53049
Number of extensions: 555020
Number of successful extensions: 1276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)