Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00575
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64; Euk... 153 4e-36
UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella ve... 127 2e-28
UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1; Di... 126 6e-28
UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like; ... 122 5e-27
UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|R... 117 3e-25
UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 113 4e-24
UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, who... 110 3e-23
UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene pr... 104 1e-21
UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17; Di... 103 3e-21
UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3; Dik... 101 2e-20
UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 100 2e-20
UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=... 88 1e-16
UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n... 85 1e-15
UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2; Cryptosporid... 84 2e-15
UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=... 84 3e-15
UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 75 1e-12
UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 70 5e-11
UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q4T683 Cluster: Chromosome undetermined SCAF8882, whole... 63 6e-09
UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Ere... 57 4e-07
UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 55 2e-06
UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n... 50 3e-05
UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yar... 48 2e-04
UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 47 4e-04
UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Klu... 46 5e-04
UniRef50_Q3LWA3 Cluster: Splicing factor 3b; n=1; Bigelowiella n... 43 0.007
UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza sativa... 42 0.012
UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.083
UniRef50_Q55BV8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.33
UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosom... 36 0.58
UniRef50_UPI000155590D Cluster: PREDICTED: similar to cell surfa... 36 1.0
UniRef50_A0E766 Cluster: Chromosome undetermined scaffold_80, wh... 34 2.4
UniRef50_UPI0000EBEC9A Cluster: PREDICTED: similar to KIAA1210 p... 34 3.1
UniRef50_UPI0000F34693 Cluster: Uncharacterized protein KIAA1210... 34 3.1
UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3; ... 34 3.1
UniRef50_Q0HKR3 Cluster: Flagellar hook-associated 2 domain prot... 33 5.5
UniRef50_Q57XR8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q14P60 Cluster: Putative dna primase protein; n=1; Spir... 33 7.2
>UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64;
Eukaryota|Rep: Splicing factor 3B subunit 3 - Homo
sapiens (Human)
Length = 1217
Score = 153 bits (370), Expect = 4e-36
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 1124 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 1183
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 1184 SMEPNKQKNVSEELDRTPPEVSKKLE 1209
Score = 144 bits (349), Expect = 1e-33
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1037 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1096
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 1097 VGETVLSLQKTTLIPGGSESLVYTTLSG 1124
>UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1171
Score = 127 bits (306), Expect = 2e-28
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LDYDT+A +DKFGN+ +RLP SDDVDEDPTG KA WDRGLLNGA QK + + N+ VG
Sbjct: 1009 LDYDTLAGADKFGNIFTVRLPSGSSDDVDEDPTGTKAFWDRGLLNGAQQKLETMCNYFVG 1068
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVG 269
ETV SLQ+ATLIPGGSE+L++ L G
Sbjct: 1069 ETVLSLQKATLIPGGSESLVFTTLSG 1094
Score = 89.0 bits (211), Expect = 8e-17
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTSRED DFFQHLEMH+RSE P +V+DGDLCE +N
Sbjct: 1094 GGVGMLVPFTSREDIDFFQHLEMHLRSEQ----------------PSLSVVDGDLCEHYN 1137
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
SLD K++ IA +L+RTPAEV K L+
Sbjct: 1138 SLDYSKRRTIAEELDRTPAEVSKKLE 1163
>UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: CPSF domain-containing
protein - Dictyostelium discoideum AX4
Length = 1256
Score = 126 bits (303), Expect = 6e-28
Identities = 55/86 (63%), Positives = 73/86 (84%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++G L+PFTSRED DFF LEM+MRS+ PLCGRDHL++RSYY+PVKN+IDGDLCEQF+
Sbjct: 1163 GAIGALIPFTSREDVDFFSTLEMNMRSDCLPLCGRDHLAYRSYYFPVKNIIDGDLCEQFS 1222
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
+L+ KQ +I+ +L R+P+EV K L+
Sbjct: 1223 TLNYQKQLSISEELSRSPSEVIKKLE 1248
Score = 104 bits (250), Expect = 1e-21
Identities = 45/89 (50%), Positives = 65/89 (73%)
Frame = +3
Query: 9 ILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHV 188
+LDYDT+A +DKFGN+ ++RLP +SD+V+EDPTG K ++ G LNGA K D + NF V
Sbjct: 1077 MLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLNGAPHKLDHIANFFV 1136
Query: 189 GETVTSLQRATLIPGGSEALLYQQLVGLL 275
G+TVT+L + +L+ GG E +LY + G +
Sbjct: 1137 GDTVTTLNKTSLVVGGPEVILYTTISGAI 1165
>UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like;
n=1; Medicago truncatula|Rep: CPSF A subunit,
C-terminal; WD40-like - Medicago truncatula (Barrel
medic)
Length = 632
Score = 122 bits (295), Expect = 5e-27
Identities = 53/90 (58%), Positives = 70/90 (77%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+G L FTSR+D DFF HLEMHMR +N PLCGRDH+++RS Y+PVK+VIDGDLCEQF
Sbjct: 542 GSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 601
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLKTFEL 535
+L Q+ IA +L+RT E+ K L+ +++
Sbjct: 602 TLPMDLQRKIADELDRTRGEILKKLEEYKI 631
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +3
Query: 87 DDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYQQLV 266
D + EDPTG + W++G LNGA K + +V FHVG+ ++ LQ+A+LIPGG E +L ++
Sbjct: 482 DTMAEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLIPGGGECILNGTVM 541
Query: 267 G 269
G
Sbjct: 542 G 542
>UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1196
Score = 117 bits (281), Expect = 3e-25
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G LLPF+SR + +FF HLEMHMR E + GRDH++FRSYY PVKNVIDGDLCEQF
Sbjct: 1104 GGIGCLLPFSSRSEIEFFTHLEMHMRQEAPSIVGRDHMAFRSYYAPVKNVIDGDLCEQFG 1163
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
+L Q+ IA +++RTP E+ K L+
Sbjct: 1164 ALPADVQRRIAEEMDRTPGEILKKLE 1189
Score = 97.9 bits (233), Expect = 2e-19
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LDYDT+A +DKFGN+ + RLP+ VS+D+D+DPTG K ++ +G+LNGA K + ++G
Sbjct: 1019 LDYDTLAGADKFGNIFVNRLPKDVSEDMDDDPTGGKNIYSQGVLNGAPNKSETSAQTYIG 1078
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVG 269
ETV +L + L PGG E ++Y +G
Sbjct: 1079 ETVCALTKGALQPGGIEIIMYGTFMG 1104
>UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Plasmodium falciparum 3D7|Rep: Splicing
factor 3b, subunit 3, 130kD, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1329
Score = 113 bits (271), Expect = 4e-24
Identities = 46/86 (53%), Positives = 67/86 (77%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++G +P+ ++E+ + QHLE+ +R+E PLCGR+H+ FRSYY+PV+NV+DGDLCEQF+
Sbjct: 1237 GTIGAFIPYDNKEELELTQHLEIILRTEKPPLCGREHIFFRSYYHPVQNVVDGDLCEQFS 1296
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
SL QK IA DLERTP ++ + L+
Sbjct: 1297 SLSYDAQKKIANDLERTPEDILRKLE 1322
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQ--KGDVVV 176
+ ILD+ TI +DKF +V I+R+P+ D E NK + ++N +++ K + ++
Sbjct: 1149 SEILDHHTIMAADKFDSVFILRVPEEAKQD--EYGITNKCWYGGEIMNSSTKNRKLEHMM 1206
Query: 177 NFHVGETVTSLQRATLIPGGSEALLYQQLVGLLAFY 284
+FH+GE VTS+Q+ L P SE ++Y ++G + +
Sbjct: 1207 SFHIGEIVTSMQKVRLSPTSSECIIYSTIMGTIGAF 1242
>UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1178
Score = 110 bits (264), Expect = 3e-23
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+ L PF ++ED DFF HLEM++R E+ PL GRDH+ FRS Y P K++IDGDLC+QF
Sbjct: 1086 GSIAALYPFDNKEDIDFFLHLEMYLRVEHQPLSGRDHMQFRSAYGPCKSIIDGDLCDQFG 1145
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
++ KQ+A+A + +RTPA++ K L+
Sbjct: 1146 NMQYNKQRAVAEEFDRTPADIIKKLE 1171
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/95 (37%), Positives = 58/95 (61%)
Frame = +3
Query: 3 TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 182
+++LDY T+ DKF N+ + R+P + ++ +E P K D+G +NGA K D + NF
Sbjct: 998 STVLDYHTVIAGDKFENIFVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAPFKMDQICNF 1057
Query: 183 HVGETVTSLQRATLIPGGSEALLYQQLVGLLAFYY 287
+VGE +TSLQ+ L+ SE ++Y +G +A Y
Sbjct: 1058 YVGEVITSLQKIALVSTSSEVVVYGTSMGSIAALY 1092
>UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene
product; n=10; Plasmodium|Rep: Drosophila melanogaster
CG13900 gene product - Plasmodium yoelii yoelii
Length = 1235
Score = 104 bits (250), Expect = 1e-21
Identities = 44/86 (51%), Positives = 65/86 (75%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++G +P+ S+E+ + QHLE+ +R+E LCGR+H+ FRSYY+PV++VIDGDLCEQF+
Sbjct: 1143 GTIGAFIPYDSKEELELTQHLEIILRTEKHSLCGREHIFFRSYYHPVQHVIDGDLCEQFS 1202
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
SL Q+ I DLE+TP E+ + L+
Sbjct: 1203 SLPFEVQRKIGSDLEKTPDEILRKLE 1228
Score = 53.2 bits (122), Expect = 5e-06
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 14/108 (12%)
Frame = +3
Query: 3 TSILDYDTIAVSDKFGNVAIMRLP----------QSVSDDVDEDPTG--NKALWDRGLLN 146
+ ILD+ TI +DKF +V I+R+ V ++ ++ G NK + ++N
Sbjct: 1041 SEILDHHTIIAADKFDSVFILRVSLLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVIN 1100
Query: 147 GASQ--KGDVVVNFHVGETVTSLQRATLIPGGSEALLYQQLVGLLAFY 284
+++ K + +++FH+GE VTSLQ+ L P SE ++Y ++G + +
Sbjct: 1101 SSTKNRKMEHIMSFHIGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAF 1148
>UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17;
Dikarya|Rep: Pre-mRNA-splicing factor rse1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1206
Score = 103 bits (247), Expect = 3e-21
Identities = 49/90 (54%), Positives = 63/90 (70%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++GV PF ++ED FFQ LE +R E PL GRDHL++RSYY PVK VIDGDLCE +
Sbjct: 1114 GTVGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRDHLAYRSYYAPVKCVIDGDLCEMYY 1173
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLKTFEL 535
SL Q+ IA +L+RT AEV K ++ F +
Sbjct: 1174 SLPHPVQEMIANELDRTIAEVSKKIEDFRV 1203
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/92 (35%), Positives = 56/92 (60%)
Frame = +3
Query: 9 ILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHV 188
++DYDT+A DKFGN+ ++R P+ VS DE+ + +K + ++ LN K D++ +F
Sbjct: 1028 LVDYDTLAGGDKFGNIWLLRCPEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFT 1087
Query: 189 GETVTSLQRATLIPGGSEALLYQQLVGLLAFY 284
+ TSLQ+ L+ G E LL+ L+G + +
Sbjct: 1088 NDIPTSLQKVQLVEGAREVLLWTGLLGTVGVF 1119
>UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 979
Score = 101 bits (241), Expect = 2e-20
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++GV +PF +RED DFF LE HMR E L GRDHL++R YY P K V+DGDLCE++
Sbjct: 803 GTVGVFVPFVTREDADFFLALEQHMRGEEPSLIGRDHLAYRGYYEPAKGVVDGDLCERYQ 862
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNL 520
L K++ IA +L+R+ EV++ +
Sbjct: 863 LLPGDKKQRIAAELDRSVREVERKI 887
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +3
Query: 3 TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 182
T+++DYD++A DKFGN I+R PQ S + DE P ++ L R L+GA + + +F
Sbjct: 716 TTMVDYDSVAGGDKFGNFWIVRTPQQASLEADE-PGAHRLLHAREHLHGAPHRLQLTAHF 774
Query: 183 HVGETVTSLQRATLIPGGSEALLYQQLVGLLAFY 284
H + T + + L+ GG E L++ G + +
Sbjct: 775 HTQDIPTGITKTHLVVGGQEVLVWSGFQGTVGVF 808
>UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3;
Dikarya|Rep: Pre-mRNA-splicing factor RSE1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1217
Score = 101 bits (241), Expect = 2e-20
Identities = 44/86 (51%), Positives = 63/86 (73%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++G L+PF S +D +F LEMHMR+++ L GRDH+++R YY P+K V+DGDLCE F+
Sbjct: 1124 GAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGYYVPIKGVVDGDLCESFS 1183
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
L KQ+AIA DL+R+ +V K L+
Sbjct: 1184 LLPYPKQQAIALDLDRSVGDVLKKLE 1209
Score = 83.8 bits (198), Expect = 3e-15
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
+DY+T+A DKFGN+ I RL S+S+ VD+DPTG L ++ L GA+ K +++ ++++G
Sbjct: 1039 VDYETVACGDKFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIG 1098
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVG 269
VTS+ + L+ GG + L+Y + G
Sbjct: 1099 SVVTSITKIPLVAGGRDVLVYTTISG 1124
>UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Babesia bovis|Rep: Splicing factor 3b,
subunit 3, 130kD, putative - Babesia bovis
Length = 1169
Score = 100 bits (240), Expect = 2e-20
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+G L+PF S+++ DF QHLEM M +E PLCGR+H +RSYY PV+ V+DGDLCEQF
Sbjct: 1077 GSIGALVPFQSKDELDFLQHLEMLMATEAPPLCGREHSFYRSYYVPVQQVVDGDLCEQFR 1136
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNL 520
L +Q+ +A L+ T V + L
Sbjct: 1137 HLTEAQQRKVAQQLDTTVNNVLRKL 1161
>UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1273
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G+LG L+PF SR H FQ LE+ +RS++ P+ GRDHL+FRSY+ PVK+VIDGDL E+F
Sbjct: 1150 GTLGALIPFNSRRQHKMFQQLELQLRSDDKPMSGRDHLAFRSYFNPVKSVIDGDLIERFL 1209
Query: 446 SLDPGKQKAIAGDL 487
L K+++I G L
Sbjct: 1210 VLSRDKRESIVGQL 1223
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 3 TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 182
T +LDYDT DKFGN+ ++R PQ VS+ DE P G+ L D+ L G + + D V ++
Sbjct: 1062 TEMLDYDTTVGGDKFGNLWLVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHY 1121
Query: 183 HVGETVTSLQRATLIPGGSEALLYQQLVGLL 275
+ S+Q+ L+ G + + L G L
Sbjct: 1122 FANDIPISIQKTHLLSGAERIIFWAGLQGTL 1152
>UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1231
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+GVL+PF S+++ DF QHLEM + ++ + GR+ FRSYY+PV+N++DGDLCE F
Sbjct: 1140 GSIGVLIPFVSKDELDFLQHLEMLLCNQIDTVTGREVQMFRSYYFPVQNIVDGDLCEMFT 1199
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
+L K +A L AEV K LK
Sbjct: 1200 ALGDEKFN-VANQLNLKVAEVVKKLK 1224
Score = 37.5 bits (83), Expect = 0.25
Identities = 28/87 (32%), Positives = 42/87 (48%)
Frame = +3
Query: 9 ILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHV 188
+LDY T+ DKF ++ + R+P + +DV S + FH+
Sbjct: 1073 LLDYSTVIAGDKFDSLFVSRVPHN--EDVVR-----------------SNYFEYHNQFHL 1113
Query: 189 GETVTSLQRATLIPGGSEALLYQQLVG 269
G+ VTSLQR + P SE +LY L+G
Sbjct: 1114 GDIVTSLQRVRINPIHSEVVLYTTLMG 1140
>UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3b
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1108
Score = 88.2 bits (209), Expect = 1e-16
Identities = 41/89 (46%), Positives = 55/89 (61%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +GVL+PF RED +FF LEM +++ SPL S+R YP VIDGDLC+ FN
Sbjct: 1015 GRIGVLIPFNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYRGTNYPGIGVIDGDLCDYFN 1074
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLKTFE 532
+DP Q IA +LE TP ++Q + F+
Sbjct: 1075 QMDPKLQLQIANNLEMTPVQIQLKCEQFK 1103
>UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n=1;
Theileria annulata|Rep: Splicing factor 3b subunit,
putative - Theileria annulata
Length = 1340
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+GVL+PF S+++ DF QHLEM M ++ + GR+ FRSYY+PV+N++DGDLCE +
Sbjct: 1250 GSIGVLVPFVSKDELDFLQHLEMLMCNQIDTVTGREVQMFRSYYFPVQNIVDGDLCEMYM 1309
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
+LD + IA L E+ K LK
Sbjct: 1310 TLD--DKYNIANQLNLKVNEIIKKLK 1333
Score = 36.7 bits (81), Expect = 0.44
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +3
Query: 9 ILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHV 188
+LDY T+ DKF ++ + R+P + +DV S + FH+
Sbjct: 1183 LLDYSTVIAGDKFDSIFVSRVPHN--EDVVR-----------------SNYFEYHNQFHL 1223
Query: 189 GETVTSLQRATLIPGGSEALLYQQLVG 269
G+ VTS QR + P SE +LY L+G
Sbjct: 1224 GDIVTSFQRVRINPIHSEVVLYTTLMG 1250
>UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2;
Cryptosporidium|Rep: CG13900 gene product -
Cryptosporidium hominis
Length = 1318
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+G L P + ED + LE+ +R + S L RDHL FRSYY PV NVIDGD C+ F
Sbjct: 1226 GSIGSLSPILNNEDIELLSKLEILLRKQKSTLLSRDHLMFRSYYSPVHNVIDGDFCQTFT 1285
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLKTFE 532
LD Q IA L+ T E+ K L ++
Sbjct: 1286 ILDSKIQSEIASKLDVTVEEIYKKLDDYK 1314
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +3
Query: 9 ILDYDTIAVSDKFGNVAIMRLPQSVSDDVD--EDPTGNKALWDRGLLNGASQKGDVVVNF 182
+LDY TIAVSDKF N+ + R+P SDD T N L+ + + + V F
Sbjct: 1140 VLDYHTIAVSDKFDNIIVSRVPVEASDDFSFVTSFTDNNNSQSSALMR--THQINTVAQF 1197
Query: 183 HVGETVTSLQRATLIPGGSEALLYQQLVG 269
H+G+ VT LQ++ L P +EA++Y ++G
Sbjct: 1198 HLGDIVTCLQKSQLTPTSAEAIIYGTVLG 1226
>UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1145
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/85 (47%), Positives = 54/85 (63%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G L L+P S+ D DF+QHLEMHMR + L R+H+SFRS PVK+ +DGDLCE +
Sbjct: 1052 GGLSALIPLQSQNDIDFYQHLEMHMRVHWTNLTDRNHISFRSSIVPVKDTVDGDLCELYE 1111
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNL 520
L Q+ IA ++E+ E+ K L
Sbjct: 1112 RLPYEIQQEIAEEMEKEVNEIIKKL 1136
Score = 49.6 bits (113), Expect = 6e-05
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
L+ T+ SDKFG + + +LP+ + + +P + + G+S K F VG
Sbjct: 968 LNQSTVLASDKFGEIFMYQLPKEIEEQA-LNPFSTLLQPHKTIYEGSSYKMVTATQFFVG 1026
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVGLLA 278
+ TS + +LIPG LY +G L+
Sbjct: 1027 DIATSFAQCSLIPGAPSIFLYSNFMGGLS 1055
>UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
albicans|Rep: Pre-mRNA-splicing factor RSE1 - Candida
albicans (Yeast)
Length = 1219
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/85 (37%), Positives = 55/85 (64%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++G+L+P S+ + + +L+++M+ + L G+DHL RSYY P+KNVIDGDL E+F
Sbjct: 1126 GTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYNPIKNVIDGDLLERFL 1185
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNL 520
D + I+ L ++ +++K L
Sbjct: 1186 EFDISLKIEISRKLNKSVNDIEKKL 1210
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LD DT+ DKFGN+ + R+ + +S D+D T K G+LN K ++ FH+G
Sbjct: 1043 LDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKT--QDGILNSCPYKLQNLIEFHIG 1100
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVGLLAFYYRL-HQEKIMTSFNI 326
+ +TS L G+E+++Y L G + L + ++ FN+
Sbjct: 1101 DIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELLFNL 1146
>UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomycetaceae|Rep: Pre-mRNA-splicing factor RSE1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1256
Score = 69.7 bits (163), Expect = 5e-11
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRS-------------ENSPLCGRDHLSFRSYYYPV 406
G+LG+LLP ++ + F L++ +R L G+DHL FRSYY PV
Sbjct: 1150 GTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRSYYNPV 1209
Query: 407 KNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVQKNL 520
KNV+DGDL E+F L + I +L RTP E++K +
Sbjct: 1210 KNVMDGDLIERFYELSQSMKIRIGTELNRTPREIEKKI 1247
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LDYDTI DKFGN+ + R+P+++S D+D + + LNG+ + + F++
Sbjct: 1067 LDYDTIIGGDKFGNIFVSRVPETISQQSDKD--WSLLRYQESYLNGSGSRLKNICEFYLQ 1124
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVGLLAFYYRLHQE 302
+ TS + +L+ GG E+++Y + G L L E
Sbjct: 1125 DIPTSFTKGSLVMGGKESIIYTGIQGTLGLLLPLSTE 1161
>UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1206
Score = 68.9 bits (161), Expect = 9e-11
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSP-------------LCGRDHLSFRSYYYPV 406
GSLG P S+ + FF LE +R P L G+D L FR YY PV
Sbjct: 1100 GSLGFFEPLISKLEVSFFTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKFRGYYNPV 1159
Query: 407 KNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVQKNL 520
KNVIDGD E + LDP + IA +L+RTP ++++ +
Sbjct: 1160 KNVIDGDFVEYYFELDPRTKTKIATELDRTPRDIERKI 1197
Score = 55.6 bits (128), Expect = 9e-07
Identities = 33/103 (32%), Positives = 53/103 (51%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LD+DT+ DKFGNV + R+P ++S D++ + + LN A + + F +
Sbjct: 1017 LDHDTVIGGDKFGNVFVNRIPFTLSKQADQE--WSLVKYQDHYLNSAGNRLKGLCEFFLQ 1074
Query: 192 ETVTSLQRATLIPGGSEALLYQQLVGLLAFYYRLHQEKIMTSF 320
+ T + TL+ GG E++ Y L G L F+ L K+ SF
Sbjct: 1075 DIPTLFFKGTLVTGGKESIFYTGLCGSLGFFEPL-ISKLEVSF 1116
>UniRef50_Q4T683 Cluster: Chromosome undetermined SCAF8882, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8882,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +2
Query: 404 VKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVQKNLK 523
V+NVIDGDLCEQ+NS++P KQK++A +L+RTP EV K L+
Sbjct: 102 VQNVIDGDLCEQYNSMEPHKQKSVAEELDRTPPEVSKKLE 141
>UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Eremothecium gossypii|Rep: Pre-mRNA-splicing factor RSE1
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 1288
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 359 LCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLE-RTPAEVQKNLKTFEL 535
L GRD + +RSYY PV++V DGDLCEQF L P ++ +A ++ R+ E+++ +
Sbjct: 1226 LVGRDAMMYRSYYNPVRHVTDGDLCEQFLELYPSEKNFLAARVDNRSVQEIERRIN---- 1281
Query: 536 DMRSN 550
DMR+N
Sbjct: 1282 DMRTN 1286
>UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomyces cerevisiae|Rep: Pre-mRNA-splicing factor
RSE1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1361
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 359 LCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAE 505
+ GRDH +RSYY PV+ VIDGDLCE F L +Q+ +A +L+ E
Sbjct: 1299 ILGRDHQEYRSYYAPVRKVIDGDLCENFLRLSLNEQEFLAKNLKSVQVE 1347
>UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1346
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2
Query: 359 LCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAE 505
+ R+H +RSYY PVKN+IDGDLCE+F L+ ++ I +L+ T E
Sbjct: 1284 IVNRNHSKYRSYYAPVKNIIDGDLCERFLYLNSNERLEICKNLKDTKPE 1332
>UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1223
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +2
Query: 353 SPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVQKNL 520
SPL G+DHL RSY+ PVKN+IDGD E + L + I ++++P E++K L
Sbjct: 1160 SPL-GKDHLKHRSYFNPVKNIIDGDFVECYLQLLQNWKVKIGEAIDKSPNEIEKRL 1214
Score = 37.1 bits (82), Expect = 0.33
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDED 104
S LDYDTI DKFG ++I RL S VD++
Sbjct: 994 SKLDYDTIICGDKFGQISISRLDSQDSRQVDQE 1026
>UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n=1;
Trichomonas vaginalis G3|Rep: CPSF A subunit region
family protein - Trichomonas vaginalis G3
Length = 1142
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVG 191
LD T+ DKFG+ I+RLP ++DD + DP+ ++ GA K ++ +H+G
Sbjct: 967 LDRSTVCCGDKFGSFCILRLPPDINDDAEIDPSDVGHAFENEKFPGAKNKVELSNMYHIG 1026
Query: 192 ETVTSL 209
+T L
Sbjct: 1027 SPITGL 1032
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+ +P + D F+ LE M+ GR FRSYY P+K V D +L +
Sbjct: 1051 GEIGLFIPLKTDTDARLFRLLEDEMKKLIKSPVGRFIEQFRSYYTPLKCVNDSNLLLSYI 1110
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNL 520
L QK IA L+ P ++ + L
Sbjct: 1111 DLPTNLQKEIAEKLKVKPFDLSRLL 1135
>UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yarrowia
lipolytica|Rep: Pre-mRNA-splicing factor RSE1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 1143
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G++ +P S + + +E + + + L GRDH FR YY PVK V+DGD+ +
Sbjct: 1052 GTVSAFVPVVSPKQSRDLKTIEKFVCASDPGLMGRDHGRFRGYYVPVKEVVDGDMLREVL 1111
Query: 446 SLDPGKQKAI 475
+D +++ +
Sbjct: 1112 VMDEKRREEV 1121
Score = 41.5 bits (93), Expect = 0.016
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNG-ASQKGDVVVNFHV 188
+DY+T+A+ D+FG ++R+P S DED LNG A + D V +FH+
Sbjct: 972 VDYETVALGDRFGGFTMLRIPSEASKLADEDHNAVHLRQLEPTLNGPAHFRFDHVASFHI 1031
Query: 189 GETVTSL 209
+ ++
Sbjct: 1032 EDVPVAI 1038
>UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
glabrata|Rep: Pre-mRNA-splicing factor RSE1 - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 1296
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2
Query: 371 DHLSFRSYYYPVKNVIDGDLCEQFNSL 451
DH ++RSYY PVKNVIDGD+CE + +L
Sbjct: 1237 DHTAYRSYYAPVKNVIDGDICETYLNL 1263
>UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Kluyveromyces lactis|Rep: Pre-mRNA-splicing factor RSE1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1269
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 365 GRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVQKNLKTFELDMR 544
GRD LS+RS Y P KN+IDG+ EQ + P Q+ IA ++ + + +MR
Sbjct: 1206 GRDFLSYRSSYAPSKNIIDGETLEQLTTYLPSDQRWIASKMKHADSGKLDIFNKYINEMR 1265
Query: 545 SN 550
+N
Sbjct: 1266 TN 1267
>UniRef50_Q3LWA3 Cluster: Splicing factor 3b; n=1; Bigelowiella
natans|Rep: Splicing factor 3b - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP
621))
Length = 1158
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
GS+G+L+P ++ + F++L H+ + + FRS Y VIDGD C Q
Sbjct: 1066 GSIGILIPIKTKFEIVLFRNLFYHLTLGTNHFLSLSNFKFRSSNYISSRVIDGDFCSQIL 1125
Query: 446 SLDPGKQKAIA 478
Q IA
Sbjct: 1126 EFKKSTQLKIA 1136
Score = 35.9 bits (79), Expect = 0.77
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDP 107
LDYDTI +D FGNV + R+PQ ++ DP
Sbjct: 989 LDYDTILGTDYFGNVLVFRIPQLITFKSFLDP 1020
>UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza
sativa|Rep: Os07g0203700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 666
Score = 41.9 bits (94), Expect = 0.012
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFRSYYYP--VKNVIDGDLC 433
GS+ V++P TS E+H Q ++ + + +PL G DH FR P V ++DGD+
Sbjct: 563 GSIFVMIPLTS-EEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIPSGVPPILDGDML 621
Query: 434 EQFNSLDPGKQ 466
QF L +Q
Sbjct: 622 VQFLELTSEQQ 632
>UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1036
Score = 39.1 bits (87), Expect = 0.083
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVD-EDPTGNKAL--WDRGLLNGASQ---KGDVV 173
LD +++AV DKFG + I+RL + D+ + T + AL + G + D V
Sbjct: 858 LDDNSVAVGDKFGGITILRLSDDFAVDIPWKFATSSTALIQYSEGQKKPIPLDVGRIDRV 917
Query: 174 VNFHVGETVTSLQRATLIPGGSEALLYQQLVGLLAFYYRLHQEKIMTS 317
+F VGE VTSL ++ S+ L Y L+G + + E+ S
Sbjct: 918 ASFMVGEMVTSL----MVSPASKTLYYTTLLGQIGVLIPISNEEEFNS 961
>UniRef50_Q55BV8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1547
Score = 37.1 bits (82), Expect = 0.33
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 272 LGVLLPF--TSREDHDFFQHLEMHMRSENS--PLCGRDHLSFRSYYYPVKNVIDGDLCEQ 439
LG ++ F S+ ++ +++ ++ N+ PL DH +RS KN++DGDL Q
Sbjct: 1439 LGSVIVFGKLSKREYRILNNIQQILKKSNNTRPLLNNDHQLYRSELSFSKNMLDGDLLFQ 1498
Query: 440 FNSLDPGKQKAIAGDL 487
F LD Q I +
Sbjct: 1499 FLFLDDEDQLTIINSI 1514
>UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosoma
cruzi|Rep: Sf3b complex subunit 3 - Trypanosoma cruzi
Length = 1800
Score = 36.3 bits (80), Expect = 0.58
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDE--DPTGNKALWDRGLLNGASQKGDVVVNFH 185
LD TIAV+D+FG+VA +RLPQ+ E + L + Q + H
Sbjct: 1575 LDERTIAVADRFGSVAFLRLPQNARLGFAEPLHQMSDAELXEAERYAAHEQVLQEIAVHH 1634
Query: 186 VGETVTSLQRATLIPGG 236
G+ VT+L+ P G
Sbjct: 1635 TGQLVTALRVHDYDPSG 1651
>UniRef50_UPI000155590D Cluster: PREDICTED: similar to cell surface
glycoprotein OX2 receptor, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to cell surface
glycoprotein OX2 receptor, partial - Ornithorhynchus
anatinus
Length = 541
Score = 35.5 bits (78), Expect = 1.0
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -3
Query: 244 ASEPPGINVALCREVTVSPT*KLTT---TSPFCEAPLSKPLSQSALFPVGSSSTSSLTDC 74
A+ N LC V V PT L CEA KP +Q + P G STSS T
Sbjct: 244 ATSQGNFNCGLCLSVLVPPTVSLVVGKDNQVVCEASAGKPAAQISWVPPGEHSTSSRTH- 302
Query: 73 GNRIIATL 50
GN + +
Sbjct: 303 GNGTVTVV 310
>UniRef50_A0E766 Cluster: Chromosome undetermined scaffold_80, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_80,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 314 FFQHLEMHMRSENSPLCGRD-HLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIA 478
+F+ +MH+ S + L GR + + S+Y PVK + +G + F S+D + A+A
Sbjct: 75 YFEASQMHLESLKNALGGRVIYRNMASFYEPVKLIGEGLSAKVFQSIDKKSKNAVA 130
>UniRef50_UPI0000EBEC9A Cluster: PREDICTED: similar to KIAA1210
protein; n=1; Bos taurus|Rep: PREDICTED: similar to
KIAA1210 protein - Bos taurus
Length = 1391
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 250 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTSSLTDCG 71
S +P + L + VT +PT + T+PF +AP S S P +S +D
Sbjct: 1187 SRIKKPSQSSEDLSKNVTTAPTKPMLATAPFLQAPTSGSSSSQEEVPESDDQNNSYSDSS 1246
Query: 70 N 68
N
Sbjct: 1247 N 1247
>UniRef50_UPI0000F34693 Cluster: Uncharacterized protein KIAA1210.;
n=1; Bos taurus|Rep: Uncharacterized protein KIAA1210. -
Bos Taurus
Length = 1092
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 250 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTSSLTDCG 71
S +P + L + VT +PT + T+PF +AP S S P +S +D
Sbjct: 792 SRIKKPSQSSEDLSKNVTTAPTKPMLATAPFLQAPTSGSSSSQEEVPESDDQNNSYSDSS 851
Query: 70 N 68
N
Sbjct: 852 N 852
>UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1980
Score = 33.9 bits (74), Expect = 3.1
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQSVSDDVDE--DPTGNKALWDRGLLNGASQKGDVVVNFH 185
+D TIA SD+FG V +R+P++ + + L Q V H
Sbjct: 1770 VDERTIAASDRFGTVVFLRIPETTRTQFAQPVHQLQDAELIAEEAYLRTKQTFREVARHH 1829
Query: 186 VGETVTSLQRATLIPG-GSEALLYQQLV 266
VGE VT+L P G++A L ++V
Sbjct: 1830 VGELVTALHVQPYDPSQGTDAALATKIV 1857
>UniRef50_Q0HKR3 Cluster: Flagellar hook-associated 2 domain
protein; n=4; Shewanella|Rep: Flagellar hook-associated
2 domain protein - Shewanella sp. (strain MR-4)
Length = 455
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 172 TTSPFCEAPLSKPLSQSALFPVGSSSTSSLTDCGNRIIATLPNLSDTAIV 23
TTSP E LS + F + S+T SLTD N+I + N TA +
Sbjct: 117 TTSPIGEGALSIKVGSGTAFNIDVSATDSLTDIMNKINKSDDNTDVTATI 166
>UniRef50_Q57XR8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1834
Score = 33.1 bits (72), Expect = 5.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 12 LDYDTIAVSDKFGNVAIMRLPQ 77
LD TIA D+FGNV +RLPQ
Sbjct: 1611 LDERTIAAGDRFGNVVFLRLPQ 1632
>UniRef50_Q14P60 Cluster: Putative dna primase protein; n=1;
Spiroplasma citri|Rep: Putative dna primase protein -
Spiroplasma citri
Length = 626
Score = 32.7 bits (71), Expect = 7.2
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +2
Query: 278 VLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDP 457
VL SR+ DF+Q ++ + L D +++ + + +NV LC++ N DP
Sbjct: 494 VLQLLASRKAADFYQRKIGNLNFDGYRLLANDIITYYNGHLGAENVKINMLCDEIN--DP 551
Query: 458 GKQKAIAGDLERTPAEVQKNLKTFE 532
+K + + ++ +++ N K E
Sbjct: 552 NLKKILMDIINKSTIKIKYNKKELE 576
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,915,954
Number of Sequences: 1657284
Number of extensions: 11813779
Number of successful extensions: 26618
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 25796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26602
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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