Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00575
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 153 6e-37
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 153 6e-37
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 153 6e-37
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 153 6e-37
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 153 6e-37
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 153 6e-37
AK131415-1|BAD18562.1| 803|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein. 31 4.3
AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open readi... 31 4.3
AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens ... 31 4.3
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 30 7.5
BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein. 30 7.5
BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein. 30 7.5
BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein. 30 7.5
AK123305-1|BAC85577.1| 269|Homo sapiens protein ( Homo sapiens ... 30 7.5
AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant p... 30 7.5
BC028290-1|AAH28290.1| 767|Homo sapiens TBC1 domain family, mem... 29 9.9
AK129590-1|BAC85189.1| 133|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK092763-1|BAC03969.1| 640|Homo sapiens BL27 mRNA. protein. 29 9.9
AB051853-1|BAB56159.1| 731|Homo sapiens rho-GTPase activating p... 29 9.9
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 1160 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 1219
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 1220 SMEPNKQKNVSEELDRTPPEVSKKLE 1245
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1073 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1132
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 1133 VGETVLSLQKTTLIPGGSESLVYTTLSG 1160
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 306 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 365
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 366 SMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 1124 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 1183
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 1184 SMEPNKQKNVSEELDRTPPEVSKKLE 1209
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1037 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1096
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 1097 VGETVLSLQKTTLIPGGSESLVYTTLSG 1124
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 306 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 365
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 366 SMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 306 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 365
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 366 SMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 153 bits (370), Expect = 6e-37
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +2
Query: 266 GSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFN 445
G +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFN
Sbjct: 1124 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 1183
Query: 446 SLDPGKQKAIAGDLERTPAEVQKNLK 523
S++P KQK ++ +L+RTP EV K L+
Sbjct: 1184 SMEPNKQKNVSEELDRTPPEVSKKLE 1209
Score = 144 bits (349), Expect = 2e-34
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 185
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1037 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1096
Query: 186 VGETVTSLQRATLIPGGSEALLYQQLVG 269
VGETV SLQ+ TLIPGGSE+L+Y L G
Sbjct: 1097 VGETVLSLQKTTLIPGGSESLVYTTLSG 1124
>AK131415-1|BAD18562.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ16525 fis, clone OCBBF2005433, weakly similar
to N-CHIMAERIN. ).
Length = 803
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -3
Query: 250 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
+S+ +PP + +CR V+ + PF E P + LSQ L P S+ST+
Sbjct: 206 ASSEQPPPLPRKMCRSVSTDNL-SPSLLKPFQEGPSGRSLSQENLPPEASASTA 258
>BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 153 SQKGDVVVNFHVGETVTSLQRATLIP 230
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open reading
frame 22 protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 153 SQKGDVVVNFHVGETVTSLQRATLIP 230
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens
cDNA FLJ44315 fis, clone TRACH3000014. ).
Length = 976
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 153 SQKGDVVVNFHVGETVTSLQRATLIP 230
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 29.9 bits (64), Expect = 7.5
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 253 YSSASEPPGINVA-----LCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
Y A PPGI+V L VTVS + +TTT+P P +A G++ST+
Sbjct: 378 YCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTT 437
Query: 88 SLTDCGNRIIATLP 47
+ T + A +P
Sbjct: 438 TTTSALAPVAAIIP 451
>BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein.
Length = 547
Score = 29.9 bits (64), Expect = 7.5
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 253 YSSASEPPGINVA-----LCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
Y A PPGI+V L VTVS + +TTT+P P +A G++ST+
Sbjct: 315 YCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTT 374
Query: 88 SLTDCGNRIIATLP 47
+ T + A +P
Sbjct: 375 TTTSALAPVAAIIP 388
>BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 7.5
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 253 YSSASEPPGINVA-----LCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
Y A PPGI+V L VTVS + +TTT+P P +A G++ST+
Sbjct: 378 YCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTT 437
Query: 88 SLTDCGNRIIATLP 47
+ T + A +P
Sbjct: 438 TTTSALAPVAAIIP 451
>BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 7.5
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 253 YSSASEPPGINVA-----LCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
Y A PPGI+V L VTVS + +TTT+P P +A G++ST+
Sbjct: 378 YCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTT 437
Query: 88 SLTDCGNRIIATLP 47
+ T + A +P
Sbjct: 438 TTTSALAPVAAIIP 451
>AK123305-1|BAC85577.1| 269|Homo sapiens protein ( Homo sapiens
cDNA FLJ41311 fis, clone BRAMY2042760. ).
Length = 269
Score = 29.9 bits (64), Expect = 7.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 219 TLIPGGSEALLYQQLVGLLAFYYRLHQEKIMTS 317
T + G +++ LVG + +YYR H++K++ S
Sbjct: 210 TKVKHGHSKVVWCALVGKIFYYYRSHEDKVLLS 242
>AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant
protein.
Length = 636
Score = 29.9 bits (64), Expect = 7.5
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 253 YSSASEPPGINVA-----LCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
Y A PPGI+V L VTVS + +TTT+P P +A G++ST+
Sbjct: 262 YCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTT 321
Query: 88 SLTDCGNRIIATLP 47
+ T + A +P
Sbjct: 322 TTTSALAPVAAIIP 335
>BC028290-1|AAH28290.1| 767|Homo sapiens TBC1 domain family, member
16 protein.
Length = 767
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 175 TTTSPFCEAPLSKPLSQS--ALFPVGSSSTSSLTDCGNR 65
T +SPFC +P+S L++S ++F SS S +D G R
Sbjct: 232 TFSSPFCLSPISAALAESRGSVFLESDSSPPSSSDAGLR 270
>AK129590-1|BAC85189.1| 133|Homo sapiens protein ( Homo sapiens
cDNA FLJ26079 fis, clone RCT03187. ).
Length = 133
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 178 LTTTSPFCEAPLSKPLSQSALFPVGSSSTSSLTDCGNRI 62
LT ++ FC + L + S++ G STS LT RI
Sbjct: 15 LTGSAGFCASSLKAKIKMSSVLSSGGGSTSRLTGAAGRI 53
>AK092763-1|BAC03969.1| 640|Homo sapiens BL27 mRNA. protein.
Length = 640
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 250 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
+S+ +PP + +CR V+ + PF E P + LSQ L S+ST+
Sbjct: 127 ASSEQPPPLPRKMCRSVSTDNL-SPSLLKPFQEGPSGRSLSQEDLPSEASASTA 179
>AB051853-1|BAB56159.1| 731|Homo sapiens rho-GTPase activating
protein protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 250 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 89
+S+ +PP + +CR V+ + PF E P + LSQ L S+ST+
Sbjct: 127 ASSEQPPPLPRKMCRSVSTDNL-SPSLLKPFQEGPSGRSLSQEDLPSEASASTA 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,761,733
Number of Sequences: 237096
Number of extensions: 1839247
Number of successful extensions: 7863
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7863
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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