Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00573
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.69 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 565 TLLYQLISICSDGYLSF*RLEAA 497
           T  Y LI +C+ GYL F  L+ A
Sbjct: 285 TPYYLLIEVCNAGYLPFILLQVA 307


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 551 LVQKGILLPXSPVTPVPEANEELSP 625
           L +K  + P +P TP P   E L+P
Sbjct: 87  LAEKVSVSPTTPPTPSPPPEERLTP 111


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 232 NDNFDEDEKKLSKRHLLEKA--VDIYQYLLTRL*RMAIWQRNRMVRRCERIALGLV 393
           N    E EK+      L +A  ++I   L     ++ IW +NR +++ +R+  GL+
Sbjct: 262 NKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 317


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 232 NDNFDEDEKKLSKRHLLEKA--VDIYQYLLTRL*RMAIWQRNRMVRRCERIALGLV 393
           N    E EK+      L +A  ++I   L     ++ IW +NR +++ +R+  GL+
Sbjct: 51  NKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 106


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 232 NDNFDEDEKKLSKRHLLEKA--VDIYQYLLTRL*RMAIWQRNRMVRRCERIALGLV 393
           N    E EK+      L +A  ++I   L     ++ IW +NR +++ +R+  GL+
Sbjct: 51  NKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 106


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 139 IVNVIFNITFMIYLEHKNFITQS 71
           + NV+  I    Y   KNFI +S
Sbjct: 166 VSNVVLKILVEKYRHQKNFINES 188


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 563 PSVPTHLYLLGRISFFLTS 507
           P +  +LY+L R+ + LTS
Sbjct: 224 PQISDNLYILCRLHYKLTS 242


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 563 PSVPTHLYLLGRISFFLTS 507
           P +  +LY+L R+ + LTS
Sbjct: 224 PQISDNLYILCRLHYKLTS 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,480
Number of Sequences: 336
Number of extensions: 2512
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)