Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00573
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens ... 38 0.038
BC016152-1|AAH16152.1| 318|Homo sapiens PHACTR4 protein protein. 36 0.16
CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin r... 35 0.21
CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin r... 35 0.21
CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin r... 35 0.21
BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein. 35 0.21
BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin r... 35 0.21
BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein. 35 0.21
AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin r... 35 0.21
AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin r... 35 0.21
AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin r... 35 0.21
Z99495-1|CAI20986.1| 484|Homo sapiens RPEL repeat containing 1 ... 34 0.47
BC101528-1|AAI01529.1| 580|Homo sapiens phosphatase and actin r... 34 0.47
BC101526-1|AAI01527.1| 580|Homo sapiens phosphatase and actin r... 34 0.47
AL591682-3|CAI40400.1| 230|Homo sapiens RPEL repeat containing ... 34 0.47
AL591682-2|CAI40399.1| 484|Homo sapiens RPEL repeat containing ... 34 0.47
AL591682-1|CAI40398.1| 264|Homo sapiens RPEL repeat containing ... 34 0.47
AL391385-3|CAI41203.1| 230|Homo sapiens RPEL repeat containing ... 34 0.47
AL391385-2|CAI41202.1| 484|Homo sapiens RPEL repeat containing ... 34 0.47
AL391385-1|CAI41201.1| 264|Homo sapiens RPEL repeat containing ... 34 0.47
AL354680-2|CAI41067.1| 484|Homo sapiens RPEL repeat containing ... 34 0.47
AL354680-1|CAI41066.1| 264|Homo sapiens RPEL repeat containing ... 34 0.47
AL008729-6|CAI95672.1| 230|Homo sapiens RPEL repeat containing ... 34 0.47
AL008729-3|CAI95669.1| 484|Homo sapiens RPEL repeat containing ... 34 0.47
AL008729-1|CAI95667.1| 264|Homo sapiens RPEL repeat containing ... 34 0.47
AB051520-1|BAB21824.1| 509|Homo sapiens KIAA1733 protein protein. 34 0.47
AL360228-2|CAI14155.1| 178|Homo sapiens phosphatase and actin r... 33 0.63
AL360228-1|CAI14154.1| 125|Homo sapiens phosphatase and actin r... 33 0.63
AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin r... 33 0.63
AL357117-1|CAI14132.1| 167|Homo sapiens phosphatase and actin r... 33 0.63
AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin r... 33 0.63
AL078593-3|CAI19813.1| 178|Homo sapiens phosphatase and actin r... 33 0.63
AL078593-2|CAI19812.1| 125|Homo sapiens phosphatase and actin r... 33 0.63
AL078593-1|CAI19811.1| 167|Homo sapiens phosphatase and actin r... 33 0.63
AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin r... 33 0.63
AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein. 33 0.63
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 31 4.4
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 31 4.4
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 31 4.4
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 31 4.4
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 31 4.4
BX537837-1|CAD97849.1| 1523|Homo sapiens hypothetical protein pr... 30 7.7
BC117364-1|AAI17365.1| 559|Homo sapiens phosphatase and actin r... 30 7.7
BC117362-1|AAI17363.1| 559|Homo sapiens phosphatase and actin r... 30 7.7
BC108303-1|AAI08304.1| 559|Homo sapiens phosphatase and actin r... 30 7.7
BC090927-1|AAH90927.1| 997|Homo sapiens SYNE1 protein protein. 30 7.7
AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein. 30 7.7
AY184203-1|AAO27771.1| 977|Homo sapiens nesprin-1 alpha 2 protein. 30 7.7
AY061756-1|AAL33799.1| 982|Homo sapiens nesprin-1 alpha protein. 30 7.7
AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein. 30 7.7
AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat contain... 30 7.7
AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat contain... 30 7.7
AL450401-2|CAI40728.1| 982|Homo sapiens spectrin repeat contain... 30 7.7
AL450401-1|CAI40727.1| 952|Homo sapiens spectrin repeat contain... 30 7.7
AL357503-5|CAI23229.1| 559|Homo sapiens phosphatase and actin r... 30 7.7
AL357503-3|CAI23228.2| 518|Homo sapiens phosphatase and actin r... 30 7.7
AL357503-2|CAM28339.1| 448|Homo sapiens phosphatase and actin r... 30 7.7
AL357503-1|CAI23227.1| 556|Homo sapiens phosphatase and actin r... 30 7.7
AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat contain... 30 7.7
AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat contain... 30 7.7
AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat contain... 30 7.7
AL138832-3|CAI42785.1| 982|Homo sapiens spectrin repeat contain... 30 7.7
AL138832-2|CAI42784.1| 952|Homo sapiens spectrin repeat contain... 30 7.7
AL121908-3|CAI22518.1| 559|Homo sapiens phosphatase and actin r... 30 7.7
AL121908-1|CAI22517.1| 556|Homo sapiens phosphatase and actin r... 30 7.7
AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat contain... 30 7.7
AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat contain... 30 7.7
AL078582-2|CAI42283.1| 982|Homo sapiens spectrin repeat contain... 30 7.7
AL078582-1|CAI42282.1| 952|Homo sapiens spectrin repeat contain... 30 7.7
AJ617581-1|CAF04087.1| 518|Homo sapiens scapinin 1C protein. 30 7.7
AJ311122-1|CAC67489.2| 518|Homo sapiens scapinin 1B protein. 30 7.7
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 7.7
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 7.7
AF444779-1|AAL38031.1| 1139|Homo sapiens myocyte inner nuclear m... 30 7.7
AF043290-1|AAC02992.1| 374|Homo sapiens lymphocyte membrane ass... 30 7.7
AB098522-1|BAC82349.1| 448|Homo sapiens scapinin S protein. 30 7.7
AB098521-1|BAC82348.1| 518|Homo sapiens scapinin protein. 30 7.7
AB018339-1|BAA34516.2| 1876|Homo sapiens KIAA0796 protein protein. 30 7.7
>AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21783 fis, clone HEP00284. ).
Length = 654
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 464 METEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
ME +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 1 MEEKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 37
>BC016152-1|AAH16152.1| 318|Homo sapiens PHACTR4 protein protein.
Length = 318
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 467 ETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
E +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 92 EKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 127
>CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 49 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 95
>CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 49 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 95
>CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 39 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 85
>BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein.
Length = 630
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 23 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 69
>BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 39 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 85
>BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein.
Length = 686
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 23 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 69
>AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 49 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 95
>AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 39 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 85
>AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 434 GLRKTVQTVEMETEKEIRKIRSSF*TLERKISVRANRDELVQKGILL 574
G K + + +K K + + LERKIS+R R+ELV++G+LL
Sbjct: 39 GFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLL 85
>Z99495-1|CAI20986.1| 484|Homo sapiens RPEL repeat containing 1
protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>BC101528-1|AAI01529.1| 580|Homo sapiens phosphatase and actin
regulator 1 protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>BC101526-1|AAI01527.1| 580|Homo sapiens phosphatase and actin
regulator 1 protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>AL591682-3|CAI40400.1| 230|Homo sapiens RPEL repeat containing 1
protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 13 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 45
>AL591682-2|CAI40399.1| 484|Homo sapiens RPEL repeat containing 1
protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>AL591682-1|CAI40398.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 162 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 194
>AL391385-3|CAI41203.1| 230|Homo sapiens RPEL repeat containing 1
protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 13 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 45
>AL391385-2|CAI41202.1| 484|Homo sapiens RPEL repeat containing 1
protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>AL391385-1|CAI41201.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 162 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 194
>AL354680-2|CAI41067.1| 484|Homo sapiens RPEL repeat containing 1
protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>AL354680-1|CAI41066.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 162 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 194
>AL008729-6|CAI95672.1| 230|Homo sapiens RPEL repeat containing 1
protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 13 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 45
>AL008729-3|CAI95669.1| 484|Homo sapiens RPEL repeat containing 1
protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 127 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 159
>AL008729-1|CAI95667.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 162 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 194
>AB051520-1|BAB21824.1| 509|Homo sapiens KIAA1733 protein protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K + + LERKIS+R +R+EL+++G+L
Sbjct: 152 KKKSEKFKHTSAALERKISMRQSREELIKRGVL 184
>AL360228-2|CAI14155.1| 178|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 178
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 60 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 92
>AL360228-1|CAI14154.1| 125|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 60 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 92
>AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 49 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 81
>AL357117-1|CAI14132.1| 167|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 167
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 54 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 86
>AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 49 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 81
>AL078593-3|CAI19813.1| 178|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 178
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 60 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 92
>AL078593-2|CAI19812.1| 125|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 60 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 92
>AL078593-1|CAI19811.1| 167|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 167
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 54 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 86
>AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 49 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 81
>AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein.
Length = 635
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K K R + LERKIS R +R+EL+++G+L
Sbjct: 50 KKTSDKFRETSAVLERKISTRQSREELIRRGVL 82
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 DND-KSSDYNFDGSLKNINKKGNNDNFDED-EKKLSKRHLLEKAVD 297
+ND ++S++ DGS K ++++G+ FDED ++K + EK D
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 639
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 DND-KSSDYNFDGSLKNINKKGNNDNFDED-EKKLSKRHLLEKAVD 297
+ND ++S++ DGS K ++++G+ FDED ++K + EK D
Sbjct: 593 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 638
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 DND-KSSDYNFDGSLKNINKKGNNDNFDED-EKKLSKRHLLEKAVD 297
+ND ++S++ DGS K ++++G+ FDED ++K + EK D
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 639
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 DND-KSSDYNFDGSLKNINKKGNNDNFDED-EKKLSKRHLLEKAVD 297
+ND ++S++ DGS K ++++G+ FDED ++K + EK D
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 639
>AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor 1
variant protein.
Length = 758
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 DND-KSSDYNFDGSLKNINKKGNNDNFDED-EKKLSKRHLLEKAVD 297
+ND ++S++ DGS K ++++G+ FDED ++K + EK D
Sbjct: 597 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 642
>BX537837-1|CAD97849.1| 1523|Homo sapiens hypothetical protein
protein.
Length = 1523
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 1179 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 1210
>BC117364-1|AAI17365.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 82 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 114
>BC117362-1|AAI17363.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 82 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 114
>BC108303-1|AAI08304.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 82 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 114
>BC090927-1|AAH90927.1| 997|Homo sapiens SYNE1 protein protein.
Length = 997
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 741 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 772
>AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein.
Length = 3212
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2868 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 2899
>AY184203-1|AAO27771.1| 977|Homo sapiens nesprin-1 alpha 2 protein.
Length = 977
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 633 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 664
>AY061756-1|AAL33799.1| 982|Homo sapiens nesprin-1 alpha protein.
Length = 982
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 638 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 669
>AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein.
Length = 3321
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2977 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 3008
>AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2619 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 2650
>AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2977 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 3008
>AL450401-2|CAI40728.1| 982|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 982
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 638 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 669
>AL450401-1|CAI40727.1| 952|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 952
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 608 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 639
>AL357503-5|CAI23229.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 82 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 114
>AL357503-3|CAI23228.2| 518|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 518
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AL357503-2|CAM28339.1| 448|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AL357503-1|CAI23227.1| 556|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 556
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 79 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 111
>AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2977 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 3008
>AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2619 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 2650
>AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2977 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 3008
>AL138832-3|CAI42785.1| 982|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 982
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 638 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 669
>AL138832-2|CAI42784.1| 952|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 952
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 608 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 639
>AL121908-3|CAI22518.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 82 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 114
>AL121908-1|CAI22517.1| 556|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 556
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 79 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 111
>AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2619 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 2650
>AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 2977 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 3008
>AL078582-2|CAI42283.1| 982|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 982
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 638 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 669
>AL078582-1|CAI42282.1| 952|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 952
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 608 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 639
>AJ617581-1|CAF04087.1| 518|Homo sapiens scapinin 1C protein.
Length = 518
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AJ311122-1|CAC67489.2| 518|Homo sapiens scapinin 1B protein.
Length = 518
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 8405 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 8436
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 8453 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 8484
>AF444779-1|AAL38031.1| 1139|Homo sapiens myocyte inner nuclear
membrane protein protein.
Length = 1139
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 795 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 826
>AF043290-1|AAC02992.1| 374|Homo sapiens lymphocyte membrane
associated protein protein.
Length = 374
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 19 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 50
>AB098522-1|BAC82349.1| 448|Homo sapiens scapinin S protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AB098521-1|BAC82348.1| 518|Homo sapiens scapinin protein.
Length = 518
Score = 29.9 bits (64), Expect = 7.7
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGIL 571
+K+ K++ + LE+K++ R R+EL++KG+L
Sbjct: 41 KKKNEKLKQTTSALEKKMAGRQGREELIKKGLL 73
>AB018339-1|BAA34516.2| 1876|Homo sapiens KIAA0796 protein protein.
Length = 1876
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 383 WVWCEDAARGTDQVQVLGLRKTVQTVEMETEK 478
W W D +Q+Q L L +QT+E++ +K
Sbjct: 1532 WAWLGDTEEELEQLQRLELSTDIQTIELQIKK 1563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,173,534
Number of Sequences: 237096
Number of extensions: 1346697
Number of successful extensions: 3574
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 3388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3574
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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