Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00573
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010038-1|AAQ22507.1|  998|Drosophila melanogaster LD44321p pro...    61   1e-09
BT003479-1|AAO39482.1|  937|Drosophila melanogaster RE59328p pro...    61   1e-09
BT001507-1|AAN71262.1|  500|Drosophila melanogaster LD38891p pro...    61   1e-09
AE014296-689|AAF47790.2| 1008|Drosophila melanogaster CG32264-PD...    61   1e-09
AE014296-688|AAS64960.1|  769|Drosophila melanogaster CG32264-PC...    61   1e-09
AE014296-687|AAF47791.2|  937|Drosophila melanogaster CG32264-PA...    61   1e-09
AY119554-1|AAM50208.1| 1054|Drosophila melanogaster GH28348p pro...    29   6.8  
AY089493-1|AAL90231.1|  734|Drosophila melanogaster GH05993p pro...    29   6.8  
AE014134-1654|AAF52786.2| 1054|Drosophila melanogaster CG4405-PB...    29   6.8  
AE014134-1653|AAF52787.2| 1054|Drosophila melanogaster CG4405-PA...    29   6.8  
AB069908-1|BAB62875.1| 1054|Drosophila melanogaster junctophilin...    29   6.8  
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h...    28   9.0  

>BT010038-1|AAQ22507.1|  998|Drosophila melanogaster LD44321p
           protein.
          Length = 998

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 313 KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 360



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 324 MTNGDLAKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           +  G  AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 264 INGGQCAKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 303


>BT003479-1|AAO39482.1|  937|Drosophila melanogaster RE59328p
           protein.
          Length = 937

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 242 KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 289



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 342 AKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 199 AKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 232


>BT001507-1|AAN71262.1|  500|Drosophila melanogaster LD38891p
           protein.
          Length = 500

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 313 KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 360



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 324 MTNGDLAKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           +  G  AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 264 INGGQCAKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 303


>AE014296-689|AAF47790.2| 1008|Drosophila melanogaster CG32264-PD,
           isoform D protein.
          Length = 1008

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 313 KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 360



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 324 MTNGDLAKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           +  G  AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 264 INGGQCAKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 303


>AE014296-688|AAS64960.1|  769|Drosophila melanogaster CG32264-PC,
           isoform C protein.
          Length = 769

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 74  KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 121



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 342 AKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 31  AKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 64


>AE014296-687|AAF47791.2|  937|Drosophila melanogaster CG32264-PA,
           isoform A protein.
          Length = 937

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 473 EKEIRKIRSSF*TLERKISVRANRDELVQKGILLPXSPVTPVPEANEE 616
           +K+  K  ++  +LERKISVRANRDELVQKGIL+P SP+  +PE  EE
Sbjct: 242 KKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEE 289



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 342 AKKQNGSAVRTNSLGSGARTPPAERTKSKFSAFGR 446
           AKKQNG+A+RTNSLGSG RTPP ER KSK SA GR
Sbjct: 199 AKKQNGAAIRTNSLGSGTRTPPLER-KSKLSALGR 232


>AY119554-1|AAM50208.1| 1054|Drosophila melanogaster GH28348p
           protein.
          Length = 1054

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 318 STMT-NGDLAKKQNG---SAVRTNSLGSGARTPPAERTKSKFSA 437
           STMT NG L     G   S   T SLG+G R P   +T+  FS+
Sbjct: 856 STMTGNGSLPSGNGGGRLSRAGTPSLGAGGRAPSQGKTEPLFSS 899


>AY089493-1|AAL90231.1|  734|Drosophila melanogaster GH05993p
           protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 318 STMT-NGDLAKKQNG---SAVRTNSLGSGARTPPAERTKSKFSA 437
           STMT NG L     G   S   T SLG+G R P   +T+  FS+
Sbjct: 536 STMTGNGSLPSGNGGGRLSRAGTPSLGAGGRAPSQGKTEPLFSS 579


>AE014134-1654|AAF52786.2| 1054|Drosophila melanogaster CG4405-PB,
           isoform B protein.
          Length = 1054

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 318 STMT-NGDLAKKQNG---SAVRTNSLGSGARTPPAERTKSKFSA 437
           STMT NG L     G   S   T SLG+G R P   +T+  FS+
Sbjct: 856 STMTGNGSLPSGNGGGRLSRAGTPSLGAGGRAPSQGKTEPLFSS 899


>AE014134-1653|AAF52787.2| 1054|Drosophila melanogaster CG4405-PA,
           isoform A protein.
          Length = 1054

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 318 STMT-NGDLAKKQNG---SAVRTNSLGSGARTPPAERTKSKFSA 437
           STMT NG L     G   S   T SLG+G R P   +T+  FS+
Sbjct: 856 STMTGNGSLPSGNGGGRLSRAGTPSLGAGGRAPSQGKTEPLFSS 899


>AB069908-1|BAB62875.1| 1054|Drosophila melanogaster junctophilin
           protein.
          Length = 1054

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 318 STMT-NGDLAKKQNG---SAVRTNSLGSGARTPPAERTKSKFSA 437
           STMT NG L     G   S   T SLG+G R P   +T+  FS+
Sbjct: 856 STMTGNGSLPSGNGGGRLSRAGTPSLGAGGRAPSQGKTEPLFSS 899


>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
            homolog protein.
          Length = 3584

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 457  GLNSLPKAENLDLVRSAGGV-LAPDPRLFVRTAEPFCFFARSPFVIV 320
            G+   PK  + D+ +S     L P+P   V   EPFC FA SP +++
Sbjct: 1200 GMRQQPKNNSTDIGQSGNEPDLEPNPNAAV---EPFCVFAISPKLLL 1243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,054,848
Number of Sequences: 53049
Number of extensions: 431711
Number of successful extensions: 1417
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)