Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00568
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 164 1e-41
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 163 3e-41
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 142 4e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 135 5e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 104 1e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 62 1e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 51 2e-07
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 39 9e-04
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 29 0.93
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 27 2.8
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 27 3.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.6
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 26 6.6
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 25 8.7
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 8.7
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 25 8.7
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 25 8.7
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 25 8.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 164 bits (399), Expect = 1e-41
Identities = 91/173 (52%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
+GIDLGTTYSCVG + + V +R P T R+ G A ++
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ------VA 58
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
+ P P+ + +HWPFKVI+ GKP +Q+E+KGETK F PEEIS
Sbjct: 59 MNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEIS 118
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
SMVL KM+ETAEAYLG V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRII
Sbjct: 119 SMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRII 171
Score = 138 bits (334), Expect = 8e-34
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLD++ +GE NVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGED
Sbjct: 172 NEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGED 230
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FD+RLVNH +EFKRK KKD
Sbjct: 231 FDSRLVNHFIQEFKRKNKKD 250
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 163 bits (395), Expect = 3e-41
Identities = 91/173 (52%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
+GIDLGTTYSCVG + + V +R P T R+ G A ++
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ------VA 58
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
+ P P+ + +HWPFKVI GKP IQ+EFKGETK F PEEIS
Sbjct: 59 MNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEIS 118
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
SMVL KM+E+AEA+LG V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRII
Sbjct: 119 SMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRII 171
Score = 137 bits (331), Expect = 2e-33
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLD++ + E NVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGED
Sbjct: 172 NEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGED 230
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FD+RLVNH A+EFKRK KKD
Sbjct: 231 FDSRLVNHFAQEFKRKNKKD 250
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 142 bits (345), Expect = 4e-35
Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
+GIDLGTTYSCV VW+ NV R P T R+ G A ++
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAA------ 62
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
+ P P+ +HWPFKVI++ G P I++ + GE K+F +EIS
Sbjct: 63 MNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEIS 122
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
+MVLTKMKE +EA L V AV+TVPAYF+DSQR ATKDAGAIAGLNVLRII
Sbjct: 123 AMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRII 175
Score = 118 bits (285), Expect = 7e-28
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLD +NVLIFDLGGGTFDVS+L I +G +FEV +TAGDTHLGGED
Sbjct: 176 NEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKI-QGGVFEVLATAGDTHLGGED 234
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FDN LV H +EFKRK K D
Sbjct: 235 FDNALVEHFIQEFKRKQKID 254
Score = 105 bits (252), Expect = 7e-24
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = +1
Query: 58 TGTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPK 237
T +II NDQG RTTPS+VAFT+TERL+GDAAKN A+NP NTVFDAKRLIGR+++DP+
Sbjct: 25 TANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPE 84
Query: 238 IQQDMNTGPSK 270
Q+D+ P K
Sbjct: 85 TQKDIKHWPFK 95
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 135 bits (327), Expect = 5e-33
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
+GIDLGTTYSCV V ++G V +R P T R+ G A ++Q P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAA----KNQAPSN 93
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
P + + +PF ++ND +P +++ G+ K+F PEEIS
Sbjct: 94 --PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEIS 151
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
+M+L+KMK+TAEAYLG V AVVTVPAYFND+QRQATKDAG IAGLNV+RI+
Sbjct: 152 AMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIV 204
Score = 111 bits (268), Expect = 8e-26
Identities = 51/80 (63%), Positives = 67/80 (83%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLDK E++++++DLGGGTFDVS+L+ID G +FEV +T+GDTHLGGED
Sbjct: 205 NEPTAAAIAYGLDKT-DTEKHIVVYDLGGGTFDVSLLSIDNG-VFEVLATSGDTHLGGED 262
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FDNR++N+LA + RK D
Sbjct: 263 FDNRVINYLARTYNRKNNVD 282
Score = 96.3 bits (229), Expect = 4e-21
Identities = 43/68 (63%), Positives = 53/68 (77%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKI 240
G +IIANDQGNR TPSYVAFT+ ERL+G+AAKN NP NT+FD KRLIGRKFD+ +
Sbjct: 55 GRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTM 114
Query: 241 QQDMNTGP 264
+D+ + P
Sbjct: 115 AKDIKSFP 122
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 104 bits (250), Expect = 1e-23
Identities = 51/75 (68%), Positives = 60/75 (80%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAALAYGLDK K + V +FDLGGGTFD+SIL ++ G +FEV+ST GDTHLGGED
Sbjct: 218 NEPTAAALAYGLDK--KNDAIVAVFDLGGGTFDISILELNNG-VFEVRSTNGDTHLGGED 274
Query: 689 FDNRLVNHLAEEFKR 733
FD LV H+ E FK+
Sbjct: 275 FDVALVRHIVETFKK 289
Score = 99.5 bits (237), Expect = 4e-22
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVW--QHGNVADHRERPGQPYHTIVRRVHGH---GASHRRRSQEPXRL 173
+GIDLGTT SC+ + Q V + E + G G S +R++ +
Sbjct: 53 IGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAV----I 108
Query: 174 EP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEISS 353
P P+ + P+K++ +E +G+T ++P +I
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEH-SNGDAWLEARGKT--YSPSQIGG 165
Query: 354 MVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
+L+KM+ETA YLG V++AVVTVPAYFNDSQRQATK AGAIAGLNVLR++
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVV 217
Score = 79.8 bits (188), Expect = 4e-16
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +1
Query: 64 TWQIIANDQGNRTTPSYVAFT-DTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKI 240
T ++IAN +G RTTPS VAFT D ERL+G +AK +NP NT F KRLIGR+F +P++
Sbjct: 71 TPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEV 130
Query: 241 QQDMNTGPSK 270
Q+D+ P K
Sbjct: 131 QRDIKEVPYK 140
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 61.7 bits (143), Expect = 1e-10
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGE----RNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHL 676
N+ AAAL YG+ K E R V I D G + VSI+ G F +KST D +L
Sbjct: 176 NDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQ-FHIKSTVCDRNL 234
Query: 677 GGEDFDNRLVNHLAEEFKRKYKKD 748
G + D L+++ A EFK KYK D
Sbjct: 235 GSRNMDKALIDYFAAEFKEKYKID 258
Score = 60.1 bits (139), Expect = 3e-10
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +1
Query: 73 IIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKIQ 243
+I N+ NR+TPS V++ + R +G+AAK+ A N NTV KRL GR +DDP+I+
Sbjct: 29 VIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIK 85
Score = 56.8 bits (131), Expect = 3e-09
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +3
Query: 300 QIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGA 479
++++ E F+ ++ + TK+K AEA L +V D V+++PA+F D QR+A +A
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAAN 165
Query: 480 IAGLNVLRII 509
IAGLN LR++
Sbjct: 166 IAGLNPLRLM 175
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +3
Query: 324 KRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLR 503
K E S L ++ E+AE +LG+ V V++VP YF D+QR+A + A AGL VL+
Sbjct: 136 KILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQ 195
Query: 504 II 509
+I
Sbjct: 196 LI 197
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/76 (28%), Positives = 45/76 (59%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
++P A LA + + ++ V++ + G +VS++++ +G L + ++ D +LGGE
Sbjct: 198 HDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSV-KGGLMTILASVHDENLGGEQ 256
Query: 689 FDNRLVNHLAEEFKRK 736
+ LVN A+EF++K
Sbjct: 257 LTDVLVNFFAKEFEKK 272
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 43 LEYGSTGTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRK 222
+ + G ++AN++GNR PS +++ + G A+ + N +N+V + + L+G+
Sbjct: 38 IAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKS 97
Query: 223 FDD 231
D+
Sbjct: 98 HDE 100
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 38.7 bits (86), Expect = 9e-04
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 318 ETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNV 497
+ + ++ EEI +M + AE + D V+TVP +FN+ QR +A I +V
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHV 190
Query: 498 LRII 509
L +I
Sbjct: 191 LALI 194
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 70 QIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLI 213
+I+ R S VAF ER+ G A N P +++ + K L+
Sbjct: 46 EIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELL 93
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 0.93
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 115 VAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKIQQDMNTGP 264
+ F+D E GD A L P + AK L+G+ D I D + P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENP 174
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 12 GIDLGTTYSCVGVWQHGNVADHRERPGQPYHTIV 113
G LG TY+ V Q G+V HR HT++
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQRHTLI 1312
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 721 FRKMVD*SVIKVFASQVRVAGCGLHFEQRSLVDSQDG 611
F +++ SV + S + +A C +FE+RSL Q G
Sbjct: 173 FNRIMTPSVNSQYISTIGLAKCEEYFEERSLASLQRG 209
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 461 HQGRRSHRRPERASHHNEP 517
H+G HR PE HH P
Sbjct: 350 HEGPEHHRGPEDKEHHKGP 368
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 396 PDRLPPSPSFLSAPCC*FLLAQIVSSHL*TRSVFSV 289
PDR P P FLS F L + +S + R+ +S+
Sbjct: 248 PDRTNPQPQFLSLTYMVFCLGTLFTSPVLVRNRYSL 283
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 IIANDQGNRTTPSY-VAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKIQ 243
+IA D+ N ++ +A + + L+ + + LN TVF ++++GR + +P Q
Sbjct: 281 LIAGDRSNVNVIAHELAHSWSGNLVTNESWQCFWLNEGMTVFLERKILGRLYGEPTRQ 338
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 239 ILGSSN---FLPISLFASNTVLLGFKATWFLA 153
ILG+S +LP+++F + ++LGF +F A
Sbjct: 526 ILGASVLRLYLPLAIFIDSELILGFPPKYFFA 557
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +1
Query: 160 NXVAL--NPNNTVFDAKRLIGRKFD 228
N +AL N N+TV DAK +G++ D
Sbjct: 10 NVIALSFNENDTVLDAKEKLGQEID 34
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 578 IFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNH 712
+ +LG GT VSIL GS+ V +T GDT + +N +N+
Sbjct: 174 VLELGAGTGLVSILCAKMGSI--VLATDGDTKVCDGVRENARLNN 216
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 542 LDKNLKGERNVLIFDLGGGTF 604
L N+ G+R VL+F +GG T+
Sbjct: 528 LKTNVPGKRRVLVFFIGGCTY 548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,016,881
Number of Sequences: 5004
Number of extensions: 60016
Number of successful extensions: 253
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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