Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00568
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 168 4e-42
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 161 7e-40
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 138 4e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 92 4e-19
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 80 2e-15
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 50 3e-06
SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11) 32 0.43
SB_16972| Best HMM Match : Ribosomal_60s (HMM E-Value=0.51) 32 0.43
SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014) 29 0.73
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.75
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 31 0.75
SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24) 30 2.3
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44) 29 3.0
SB_29315| Best HMM Match : Herpes_UL21 (HMM E-Value=0.75) 29 3.0
SB_10866| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 29 4.0
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_27317| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_655| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-20) 28 9.2
SB_46790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 168 bits (409), Expect = 4e-42
Identities = 95/173 (54%), Positives = 108/173 (62%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
VGIDLGTTYSCVGV+QHG V +R P + R+ G A ++
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQ------VA 60
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
+ P P + HWPF VI + +PKIQ+EFKGE K F PEEIS
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
SMVLTKMKETAEAYLG+ V DAVVTVPAYF+DSQRQATKDAG IAGLNVLRII
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRII 173
Score = 136 bits (329), Expect = 2e-32
Identities = 61/80 (76%), Positives = 74/80 (92%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLDK + ERNVLI+DLGGGTFDVS+LTI++G +FEVKSTAGDTHLGGED
Sbjct: 174 NEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDG-IFEVKSTAGDTHLGGED 232
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FDN++V+H ++FK+KYKKD
Sbjct: 233 FDNKMVDHFVKQFKQKYKKD 252
Score = 116 bits (280), Expect = 2e-26
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKI 240
G +IIANDQGNRTTPSYVAF+DTERLIGDAAKN VA+NP NTVFDAKRLIGRKFDDP +
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVV 83
Query: 241 QQDMNTGP 264
+DM P
Sbjct: 84 ARDMTHWP 91
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 161 bits (390), Expect = 7e-40
Identities = 91/173 (52%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHRRRSQEPXR 170
+GIDLGTTYSCVGV+Q+G V +R P T R+ G A ++
Sbjct: 7 IGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQ------VA 60
Query: 171 LEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEIS 350
L P + + WPFK+I+D KPKIQ+E+KGE K FA EEIS
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 351 SMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
SMVL KMKETAEAYLG V AV+TVPAYFNDSQRQATKDAG IAGLNVLR+I
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVI 173
Score = 158 bits (383), Expect = 5e-39
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAALAYGLDK+L GE+NVLIFDLGGGTFDVSILTID+GSLFEVKSTAGDTHLGGED
Sbjct: 174 NEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGED 233
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FDNRLVNH EFKRKYKKD
Sbjct: 234 FDNRLVNHFVAEFKRKYKKD 253
Score = 115 bits (276), Expect = 5e-26
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKI 240
G +IIANDQGNRTTPSYV FTDTERL+GDAAKN VALNP NT+FDAKRLIGR++DD +
Sbjct: 24 GKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATV 83
Query: 241 QQDMNTGPSK 270
Q DM P K
Sbjct: 84 QSDMKLWPFK 93
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 138 bits (334), Expect = 4e-33
Identities = 84/174 (48%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA----DHRERPGQPYHTIVR---RVHGHGASHRRRSQEPX 167
+GIDLGTTYSCVGV+++G V D R Y R+ G GA ++ +
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTN--- 760
Query: 168 RLEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDCGKPKIQIEFKGETKRFAPEEI 347
P + +PFKV++ KP +Q++ K E K FA EEI
Sbjct: 761 ---PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEI 817
Query: 348 SSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
S+MVLTKMKETAEAYLG V AVVTVPAYFND+QRQATKDAGAIAGL V+RII
Sbjct: 818 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRII 871
Score = 111 bits (267), Expect = 6e-25
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYG+DK +GE+N+L+FDLGGGTFDVS+LTID G +FEV +T GDTHLGGED
Sbjct: 872 NEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVATNGDTHLGGED 929
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FD ++ H + +K+K K+
Sbjct: 930 FDQNVMEHFIKLYKKKKGKN 949
Score = 97.5 bits (232), Expect = 1e-20
Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPK 237
G +IIANDQGNR TPSYVAFT+ ERLIGD AKN + NP NTVFDAKRLIGR +DD
Sbjct: 721 GRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTS 780
Query: 238 IQQDMNTGPSK*STTAANRKYRSSSKVR 321
+Q D+ P K N+K KV+
Sbjct: 781 VQNDLKFFPFK--VVDKNKKPHVQVKVK 806
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 133 bits (322), Expect = 1e-31
Identities = 83/181 (45%), Positives = 101/181 (55%), Gaps = 25/181 (13%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVA------DHRERPGQPYHTIVRRVHGHGASHR-------- 146
+GIDLGTTYSCVGV+QHG V +R P T R+ G A ++
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNT 66
Query: 147 ---------RRSQEPXRLEP*QHXXXXXXXXXXXXXXPQDSAGHEHWPF--KVINDCGKP 293
RR +P + +H + G F +V+N+ G+P
Sbjct: 67 IFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRP 126
Query: 294 KIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDA 473
K+++E+KGETK F EEISSMVL KMKETAEAYLG V DAVVTVPAYFNDSQRQATKDA
Sbjct: 127 KVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDA 186
Query: 474 G 476
G
Sbjct: 187 G 187
Score = 129 bits (312), Expect = 2e-30
Identities = 59/80 (73%), Positives = 71/80 (88%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAA+AYGLDK + ERNVLIFDLGGGTFDVS+L+I++G +FEVKST GDTHLGGED
Sbjct: 267 NEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDG-IFEVKSTHGDTHLGGED 325
Query: 689 FDNRLVNHLAEEFKRKYKKD 748
FDN +V+ ++FK+KYKKD
Sbjct: 326 FDNNMVDFFVKQFKQKYKKD 345
Score = 113 bits (271), Expect = 2e-25
Identities = 50/64 (78%), Positives = 57/64 (89%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKFDDPKI 240
G +IIANDQGNRTTPSYVAFTD ERL+GDAAKN VA+NP NT+FDAKRLIGR+FDDP +
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGV 83
Query: 241 QQDM 252
+ DM
Sbjct: 84 KDDM 87
Score = 99.5 bits (237), Expect = 3e-21
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +3
Query: 342 EISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
+ISSMVL KMKETAEAYLG V DAVVTVPAYFNDSQRQATKDAG I+GLNVLRII
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRII 266
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/68 (63%), Positives = 56/68 (82%)
Frame = +3
Query: 297 IQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAG 476
I +E GE + FAPE+IS++VL ++K AEA+LG V+ AV+TVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 477 AIAGLNVL 500
IAGL+VL
Sbjct: 62 TIAGLDVL 69
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 449 PASGHQGRRSHRRPERASHHNEPTAAALAYGLDK--NLKGERN 571
P S + RR H R NEPTAAA+AYGLDK K ERN
Sbjct: 77 PPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +2
Query: 509 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGED 688
NEPTAAALAYGL K +G NV++ DLGGGT DVS+L I +G +F + AG+ LGG+D
Sbjct: 204 NEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNI-QGGMFVTMAMAGNNRLGGQD 261
Query: 689 FDNRLVNHLAEEFKRKYKK 745
F+ R + +L + +++ +
Sbjct: 262 FNARFMQYLLQLIHKRFNR 280
Score = 67.7 bits (158), Expect = 9e-12
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQ--HGNVADHRERPGQPYHTIVRRVHGHGASHRRRSQEPXRLEP* 182
+GIDLGTTYSCVG +Q G + + + G ++ + P
Sbjct: 34 IGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPK 93
Query: 183 QHXXXXXXXXXXXXXXPQDSAGHEHWPFKVINDC-GKPKIQIEFKGETKRFAPEEISSMV 359
+ + + F+V D G + KG PEEI V
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 360 LTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
+ K++ AE L +TV AV++VPA F+ QR AT A ++AG+ VLR+I
Sbjct: 154 IKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVI 203
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 58 TGTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKNXVALNPNNTVFDAKRLIGRKF 225
+G I +++ ++ PS VAFTD L+G+ A + +NP NT++DAKR IG+ F
Sbjct: 52 SGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTF 107
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = +2
Query: 572 VLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHLAEEFKRK 736
+ ++DLGGGTFD+SIL I +G +FEVK+T GDT+LGGEDFDN L+ L EFK++
Sbjct: 2 IAVYDLGGGTFDISILEIQKG-VFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKE 55
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 HWPFKVIN-DCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVP 431
H P+KV+ IQ+++ G+ + F+PE++ +M+ T++K TAE L + V D V++VP
Sbjct: 145 HLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
Query: 432 AYFNDSQRQATKDAGAIAGLNVLRII 509
+Y+ D QR+ DA A AGLN LR++
Sbjct: 205 SYYTDRQRRCMLDASATAGLNCLRLM 230
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +2
Query: 509 NEPTAAALAYGLDKN---LKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLG 679
N+ TA +LAYG+ K RNV+ D+G + V I +G L +V STA + +LG
Sbjct: 231 NDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQL-KVLSTAVEPNLG 289
Query: 680 GEDFDNRLVNHLAEEFKRKYKKD 748
G DFD LV H A+EFK KYK D
Sbjct: 290 GRDFDYVLVEHFAQEFKTKYKID 312
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLIGDAAKN 162
G + +AN+ +R TPS+V+ D +RLIG + KN
Sbjct: 21 GGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKN 54
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 175 NPNNTVFDAKRLIGRKFDDPKIQQDMNTGPSK 270
N NT+ KR IGRKF DP +Q+++ P K
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYK 149
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 330 FAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 509
F PEE+ M+L + E + ++D V+TVP +FN ++R+A A + GLNVL+I+
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIM 139
Score = 36.3 bits (80), Expect = 0.026
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Frame = +2
Query: 509 NEPTAAALAYGL--DKNLKG--ERNVLIFDLGGGTFDVSIL------TIDEG-----SLF 643
N TA AL YGL K+ E++ + +D+G + +I+ T D G
Sbjct: 140 NSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQL 199
Query: 644 EVKSTAGDTHLGGEDFDNRLVNHLAEEFKRKYK 742
+K D LGG D RL +HL + FK+ YK
Sbjct: 200 VIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +2
Query: 539 GLDKNLKGERN-VLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHL 715
GL +N + + + VL++ LGG + DV++L++ G +++V +T D LGG +FD L++ L
Sbjct: 144 GLGQNDRSQDSTVLVYRLGGASHDVTLLSVING-MYKVLATEYDGALGGRNFDEVLLDLL 202
Query: 716 AEEFKRK 736
A +FKR+
Sbjct: 203 ANDFKRQ 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 61 GTWQIIANDQGNRTTPSYVAFTDTERLI 144
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11)
Length = 1140
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 553
W+T+ +S + P + P TS P + S+V PP S++R+ +S PLR
Sbjct: 265 WMTASISATDPIASLKPLSFATSCRTPPFSLNSCLSEVQPPLSRLRSCISVFPLR 319
>SB_16972| Best HMM Match : Ribosomal_60s (HMM E-Value=0.51)
Length = 1275
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLRF---L 547
W+T+ +S + P + P TS P S + PP S++RT +S PLR
Sbjct: 433 WMTASISATDPIANLKPLSFATSCRTPPSSLNSCLGLDQPPLSRLRTCISVFPLRSDWNR 492
Query: 546 SRPYASAAAVGSL*CEARS 490
R SA G L C +RS
Sbjct: 493 IRFSLSACRSGGLRCASRS 511
>SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014)
Length = 916
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R+ V EYGSTG W+
Sbjct: 153 STGVWEYRNMGVQEYGSTGVWE 174
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R+ V EYGSTG W+
Sbjct: 222 STGVWEYRNMGVQEYGSTGIWE 243
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S IWE R V EYGSTG W+
Sbjct: 238 STGIWEYRKMGVQEYGSTGVWE 259
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 308 STGVWEYRSMRVQEYGSTGIWE 329
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S IWE R V EYGSTG W+
Sbjct: 324 STGIWEYRSMGVQEYGSTGVWE 345
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R+ V EYGSTG W+
Sbjct: 340 STGVWEYRNRGVQEYGSTGRWE 361
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S IWE R V EYGSTG W+
Sbjct: 496 STGIWEYRKMGVQEYGSTGVWE 517
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S IWE R V EYGSTG W+
Sbjct: 614 STGIWEYRSMGVQEYGSTGVWE 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 79 STGVWEYRSVGVQEYGSTGVWK 100
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 536 STGVWEYRSMGVQEYGSTGVWE 557
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 552 STGVWEYRSMGVQEYGSTGVWE 573
Score = 27.5 bits (58), Expect(2) = 0.73
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTW 69
S +WE R V EYGSTG W
Sbjct: 169 STGVWEYRSMGVQEYGSTGVW 189
Score = 22.6 bits (46), Expect(2) = 0.73
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 46 EYGSTGTWQ 72
EYGSTG W+
Sbjct: 219 EYGSTGVWE 227
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 64 TWQIIANDQGNRTTPSYVAFT-DTERL 141
T ++I N +G+RTTPS VAFT + ERL
Sbjct: 5 TPKVIENAEGSRTTPSVVAFTPEGERL 31
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 553
W+T+ +S + P + P TS P S + V PP S +RT +S PLR
Sbjct: 675 WMTASISATDPIASLKPLSFATSCRTPPSSLNSVHGLVQPPLSGLRTCISVFPLR 729
>SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 729 LNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PL 556
L+S W T+ +S + P + P TS P + + V PP S++R+ +S PL
Sbjct: 560 LDSVFSWTTASISATDPIASLKPFSFATSCRTPQFSLNICLGLVQPPLSRLRSCISVFPL 619
Query: 555 R 553
R
Sbjct: 620 R 620
>SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24)
Length = 729
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -2
Query: 723 SSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFL 565
SS+RW +++ S SS P P VD + N S +R+ TSK + KIR+++
Sbjct: 409 SSSRW-SAKASTSSLPADGLPRVDVNNTN---SALRVLTSKSSDNKEKIRSWI 457
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 324 KRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGL 491
K+ A E I+S L+K +TA Y S V V+TVPA + + ++ ++A IAGL
Sbjct: 1000 KKVAMETINS-TLSKNADTAR-YQASDVA-WVLTVPAIWEPAAKEFMREAAYIAGL 1052
>SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44)
Length = 322
Score = 29.5 bits (63), Expect = 3.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 16 SIWERHTHVLEYGSTGTWQ 72
S+W+ HTH+L++ G W+
Sbjct: 255 SLWKYHTHILQFDGEGGWK 273
>SB_29315| Best HMM Match : Herpes_UL21 (HMM E-Value=0.75)
Length = 814
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLRF 550
W+T+ +S + P + P TS P + V PP S++R +S PLR+
Sbjct: 497 WMTASISATDPIASLKPFSFATSCRTPPFSLNSCLGLVQPPLSRLRCCISVFPLRY 552
>SB_10866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 29.5 bits (63), Expect = 3.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 16 SIWERHTHVLEYGSTGTWQ 72
S+W+ HTH+L++ G W+
Sbjct: 115 SLWKYHTHILQFDGEGGWK 133
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 553
W+T+ S + P + P TS P S + PP S++RT +S PLR
Sbjct: 632 WMTASTSVTDPIASLKPLSFATSCRTPPSSLNSCRGLDQPPLSRLRTCISVFPLR 686
>SB_20809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R+ V EYGSTG W+
Sbjct: 125 STGVWEYRNRGVQEYGSTGVWE 146
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 109 STGVWEYRSMGVQEYGSTGVWE 130
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 10 SESIWE-RHTHVLEYGSTGTWQ 72
S +WE R V EYGSTG W+
Sbjct: 72 STGVWEYRSMGVQEYGSTGVWK 93
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 644 EVKSTAGDTHLGGEDFDNRLVNHLAEEFK 730
EVK T+GD + E DN + H+ E FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 258 WPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAY 437
+P K+I+DC + + T R + ++ +V T ETA VT PA+
Sbjct: 1303 FPLKIIDDCYDDILPSDGPDTTGRSSLFGVTPIVPTPTAETASKEPPKPAPRTKVTEPAH 1362
Query: 438 FNDSQRQATK 467
+DS+ T+
Sbjct: 1363 DSDSEATETE 1372
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -2
Query: 711 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 553
W+T+ +S + P + P TS P S + PP S++R+ +S PLR
Sbjct: 769 WMTASISATDPIASLKPFSFATSCRTPPSSLNSCLGLDQPPLSRLRSRISVFPLR 823
>SB_27317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 9 VGIDLGTTYSCVGVWQHGNVADHRERPGQPYHTIVRRVHGHGASHRRRSQE 161
+G+ LG CV + G ADH+E+ +P T+ + G + ++E
Sbjct: 53 LGLCLGLVLVCVSEYLFGGQADHQEKKRKP--TVEKAAEGEESKKEEDNKE 101
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 729 LNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS 562
++S W+T+ S + P + P TS P S + PP S++RT +S
Sbjct: 867 IHSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSLNSCLGLDQPPLSRLRTRIS 922
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 386 SLSGKYSAGCGSHSSGILQRLPASGHQGRRSHRRPERASHHN 511
S S S+ SHSS P+SG R S R R+ H+
Sbjct: 202 SRSSSSSSSGSSHSSRSQSHTPSSGSGSRNSSRSASRSQSHS 243
>SB_655| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-20)
Length = 376
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 146 PMRRSVSVNATYDGVVRLPWSFAMI 72
P+R ++ N Y GV+ L W FA +
Sbjct: 153 PLRHRMTTNRMYSGVICLTWVFAAL 177
>SB_46790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 479 HRRPERASHHNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKST 658
H A EP A A +GLD +GE + L G + I GSL K T
Sbjct: 133 HNNHAWAELPTEPPAIASVHGLDFEAEGE----LRSLCQGRLQTRLDMILNGSLMTTKPT 188
Query: 659 AGDTH-LGG 682
TH +GG
Sbjct: 189 TEATHSMGG 197
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -2
Query: 729 LNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS 562
+ S W+T+ S + P + P TS P S + PP S++RT +S
Sbjct: 1230 IRSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSLNSCLGLDQPPLSRLRTRIS 1285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,638,295
Number of Sequences: 59808
Number of extensions: 483738
Number of successful extensions: 1852
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -