Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00567
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 111 8e-26
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 64 3e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 51 2e-07
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 1e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 5e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.001
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.019
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 33 0.045
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 32 0.078
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.14
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 30 0.42
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.55
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.73
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 1.7
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 2.2
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.2
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 3.0
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 3.0
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 5.2
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 6.8
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 26 6.8
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 6.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 111 bits (268), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 35 GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94
Query: 434 FANVIRYFPTQALNFAFKDKYKQVF 508
ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 95 TANVLRYFPTQALNFAFKDKFKKMF 119
Score = 69.7 bits (163), Expect = 4e-13
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Frame = +1
Query: 589 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV GI
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGI 205
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V ++ + L S + ++++ G+VD + + + GL +RG
Sbjct: 140 GAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFG 199
Query: 437 ANVIRYFPTQALNFAFKDKYKQV 505
+V+ + L F D K V
Sbjct: 200 PSVVGIVVYRGLYFGMYDTLKPV 222
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 670 FSGLGNCISKIFKSDGLIGLYRG 738
+ G+G C + +G+I L+RG
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRG 93
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 63.7 bits (148), Expect = 3e-11
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 28 GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 437 ANVIRYFPTQALNFAFKDKYKQ 502
N +R FP A+ FA + KQ
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQ 102
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + + +T P + ++ QV + YK I A I K +G+ F+RG
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290
Query: 437 ANVIRYFPTQALNF 478
+N+++ P ++ +
Sbjct: 291 SNMLKIIPVMSITW 304
Score = 29.1 bits (62), Expect = 0.73
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 664 REFSGLGNCISKIFKSDGLIGLYRGFGVS 750
+E++ L + + KI+ +GLIG +RG G +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTN 82
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 741
+P D R R + G G + + + I I+K++G+ G +RG+
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGY 289
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = +2
Query: 233 VR*GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 412
V+ G+ G G + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 413 LSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
++G+ A + R FP + F ++ ++V
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 601 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 41.5 bits (93), Expect = 1e-04
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2
Query: 284 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 454
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 455 FPTQALNFAFKDKYKQVFSAVLTRRRSSGVTSLV 556
P +AL FA D Y +++ V R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 33.1 bits (72), Expect = 0.045
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 GISAAVSKT-AVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
G A ++T V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 431 NFANVIRYFPTQALNFAFKDKYKQVFSAVLTR 526
A + R+ A F K + + +R
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
+S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 440 NVIRYFPTQALNFAFKDKYKQ 502
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 32.3 bits (70), Expect = 0.078
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 598 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGM 298
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 433
G++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 434 FANVIRYFPTQALNFAFKDKYKQVFSAVLTRR 529
++ FP A + + K+ + +L R
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270
Query: 437 ANVIRYFPTQALNFAFKDKYKQVFSAV 517
++ P A+++A + K++ V
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEILIRV 297
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 607 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
P+ +TRL D G + S + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
Score = 33.5 bits (73), Expect = 0.034
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +2
Query: 245 LPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 424
L G GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 425 RGNFANVIRYFPTQALNF 478
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.1 bits (72), Expect = 0.045
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 676 GLGNCISKIFKSDGLIGLYRGFGVSVQGISS 768
G+ + + ++KS+GL+GL+RGFG + SS
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSS 313
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 32.3 bits (70), Expect = 0.078
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 595 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG 265
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
++ ++ PI+ VK +Q ++A + YK + +I + GLL FW G
Sbjct: 212 VAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265
Query: 440 NVIRYFPTQALNFAFKDKYKQV 505
+ R + + F +K ++
Sbjct: 266 RLARLILSGGIVFTVYEKVMEI 287
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.9 bits (64), Expect = 0.42
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GIS+ + + +AP + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 24 GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72
Query: 437 ANVIRYFPTQALNFAFKDKYKQV 505
+ Y A F K K +
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKHL 95
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
I+ A SK + P++ V LQ YK D F+ I + G+ +RG
Sbjct: 201 IAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252
Query: 440 NVIRYFP 460
++++ P
Sbjct: 253 SMLKVAP 259
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 29.5 bits (63), Expect = 0.55
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 685 NCISKIFKSDGLIGLYRGFGVSVQGIS 765
+CI K +S+G LY+GFG + I+
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARIA 297
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.73
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 427
G + S VAP++ VK Q Q + G + + I +G+ +R
Sbjct: 13 GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72
Query: 428 GNFANVIRYFPTQALNFAFKDKYKQVF 508
G ++ Y P+ ++ F +K K +F
Sbjct: 73 GVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 347 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 445
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 CGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
CG++A V + V P+E +K Q+ +++ + + +GL F+RG
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKGS----------VINTISTLARSEGLKGFYRG 138
Query: 431 NFANVIRYFPT 463
+ V Y PT
Sbjct: 139 YWMGVAIYLPT 149
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 685 NCISKIFKSDGLIGLYRGFGVSV 753
N IS + +S+GL G YRG+ + V
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGV 143
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 670 FSGLGNCISKIFKSDGLIGLYRGFGVS 750
++ + + I I+K +G+ G +RGFGV+
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVT 167
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 667 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRS 545
H P R R RD RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/98 (21%), Positives = 41/98 (41%)
Frame = +2
Query: 242 GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 421
GL CG + +A+ P++ +K QV Y G + F I ++GL
Sbjct: 30 GLLACG----TTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGL 77
Query: 422 WRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRS 535
+ G +I Y + F + +K +S ++ +++
Sbjct: 78 YTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKA 115
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 676 GLGNCISKIFKSDGLIGLYRGFGVSV 753
G G ++I+K G GL+ G GV +
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRI 283
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
IS + V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 121 ISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 685 NCISKIFKSDGLIGLYRGFGVSVQGI 762
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 741
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 83 YEITPNLLFKNQELVFRDPPSACAATPTSTY 175
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 670 FSGLGNCISKIFKSDGLIGLYRG 738
F + +C K++GL GLYRG
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRG 72
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 700 IFKSDGLIGLYRGFGVSVQGIS 765
+ K++GL G Y GF S+ G+S
Sbjct: 143 LIKNEGLRGCYAGFAPSLLGVS 164
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 387 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 280
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,718,251
Number of Sequences: 5004
Number of extensions: 51630
Number of successful extensions: 182
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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