Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00567
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 9e-23
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 56 4e-08
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 50 3e-06
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 45 6e-05
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 2e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.005
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 38 0.007
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.009
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.021
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.021
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.036
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 36 0.048
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.19
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 33 0.19
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 33 0.25
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.34
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.44
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.4
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.8
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.4
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.4
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.1
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.1
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 4.1
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 29 4.1
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.1
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 28 9.5
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 104 bits (249), Expect = 9e-23
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN
Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76
Query: 434 FANVIRYFPTQALNFAFKDKYKQVF 508
AN IRYFPTQALNFAFKD+ K +F
Sbjct: 77 LANCIRYFPTQALNFAFKDQVKALF 101
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +1
Query: 589 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S GI
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGI 186
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +2
Query: 359 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 508
+YKG +D ++I K++G +S +G AN++R + F DK+K+++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELY 296
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 78.6 bits (185), Expect = 5e-15
Identities = 36/82 (43%), Positives = 59/82 (71%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN
Sbjct: 42 GIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNG 95
Query: 437 ANVIRYFPTQALNFAFKDKYKQ 502
NVIR FP A+ FA ++YK+
Sbjct: 96 TNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +2
Query: 251 GCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
G G A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRG
Sbjct: 142 GGGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRG 195
Query: 431 NFANVIRYFPTQALNFAFKDKYKQV 505
N ANVI+ P + F +K K++
Sbjct: 196 NGANVIKIAPESGIKFFAYEKAKKL 220
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 604 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/83 (22%), Positives = 44/83 (53%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F
Sbjct: 239 MAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFP 291
Query: 440 NVIRYFPTQALNFAFKDKYKQVF 508
+++ P ++ A + K +
Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFY 314
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 601 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ GI
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 427
G +A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN
Sbjct: 66 GTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNG 118
Query: 437 ANVIRYFPTQALNFA 481
+ IR FP A+ +A
Sbjct: 119 VSCIRLFPYSAVQYA 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 263 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 442
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G +
Sbjct: 162 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPS 218
Query: 443 VIRYFP 460
+ FP
Sbjct: 219 FLGLFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 440 NVIRYFPTQALNFAFKDKYKQVFS 511
++ P +A+ D + +FS
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIFS 1003
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIS 765
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+S
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVS 985
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 287 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 466
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 467 ALNFA----FKDKYKQVFSA--VLTRRRSSGVTSLVIW 562
A+ F D + +F + V T + G +V W
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + VS + P + +K +Q + RYKG++D ++ KE+G++ F RG +
Sbjct: 140 GFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFTRGIW 195
Query: 437 ANVIRYFPTQALNF 478
++R F Q L F
Sbjct: 196 PTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 359 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 502
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
Score = 32.7 bits (71), Expect = 0.34
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +1
Query: 667 EFSGLGNCISKIFKSDGLIGLYRGFGVSV 753
++SG+G ++KI++ +GL G ++G G ++
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNI 618
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 344 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 508
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG+ ++ GI
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGI 55
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQG 409
GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G
Sbjct: 22 GIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEG 81
Query: 410 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 508
+ + ++G + R ++ D+ K ++
Sbjct: 82 MKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 254 CG-ISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 421
CG +S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G +
Sbjct: 35 CGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGL 94
Query: 422 WRG 430
++G
Sbjct: 95 FKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 263 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 431 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
IS + A P++ K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158
Query: 440 NVIRYFPTQALNFAFKDK 493
R P L F F ++
Sbjct: 159 YYFRIGPHTVLTFIFLEQ 176
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 362 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
Y + +A R+ KE+G+L+ WRG +R A A + KQ+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQL 82
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +1
Query: 607 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 741
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 251 GCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
GC ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 212 GC-LAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 431 NFANVIRYFP 460
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF 741
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF 60
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVS 750
TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSIN 173
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIS 765
+PLD + RL G++ F+G +C K +++G GLY+G + G++
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVT 99
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 36.7 bits (81), Expect = 0.021
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GI+ +S P++ VK Q + +Y G D +I G+ +F +G
Sbjct: 365 GIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLL 424
Query: 437 ANVIRYFPTQA 469
A ++R FPT A
Sbjct: 425 ATILRGFPTNA 435
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 661 QREFSGLGNCISKIFKSDGLIGLYRGFGVS 750
Q ++G +C+ K+F S+GL G +RG ++
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 589 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +1
Query: 670 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 762
++G+ +C +I K + ++GLY+G + G+
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGL 221
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 121 GVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 595 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 741
C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
Score = 31.5 bits (68), Expect = 0.77
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 152 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGCGISAAVSKTAVAPIERVKLLLQV 325
AA + T P+ DH + N E R G V L ++ V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 326 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 451
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 371 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 741
T+ YPLD R+RLA V + G + CIS K G LY+GF
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGF 126
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 586 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 753
TSLC YP + ARTRL + G++++ + + + +G GLY G G V
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/102 (21%), Positives = 43/102 (42%)
Frame = +2
Query: 173 YSPSEDHIIEQNVEPRRSGRVR*GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 352
Y + +++ + + RR V + GIS ++ + P E + L+ Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 353 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 478
Q+Y+ + +E+G + G +VIR P A+ F
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 607 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIS 765
PL F +TRL + G F +S +K++G+ YRG S GIS
Sbjct: 854 PLWFIKTRLQLENQGGTRASAFK----IVSMAYKAEGIRAFYRGLTASYVGIS 902
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 592 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 759
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYG 108
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GI+ + P E VK LQ+ + AA Y+G +D + K G+L +RG
Sbjct: 48 GIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLS 103
Query: 437 ANVIRYFPTQALNFA 481
+ + P ++ FA
Sbjct: 104 SLLYGSVPKASVRFA 118
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 290 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 622 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 744
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.048
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 374 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 499
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 CGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
CG + + PI+ K +QVQ + Q A +Y+ + A I + G+ ++G
Sbjct: 207 CGAGTGLVVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQG 266
Query: 431 NFANVIRYFPTQALNFAFKDKYKQVFS 511
A ++R P F F + K + +
Sbjct: 267 LSATLVRNIPANGFFFGFYEFTKNLLT 293
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 392 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRR 529
+P+E L W G F++VI F A+N AF+++YK++ + R
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKILRIICAGR 317
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 392 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRSSG 541
+P+E +L W G ++VI F A+N F+D+YK+ +L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKK----LLRRMRRSG 184
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
+S + A P++ +K+ LQ + K +KG +D F++ + +GL ++G +
Sbjct: 29 VSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLS 87
Query: 440 NVIRYFPTQALNF 478
++ P+ AL F
Sbjct: 88 PLLMATPSTALTF 100
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 607 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 738
PLD + RL A G+ F G +C K + +GL GLY+G
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 248 PGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 427
P G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 60 PPLGLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 392 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRSSGV 544
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G +A V TA P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++G
Sbjct: 35 GATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGL 92
Query: 434 FANVIRYFP 460
+++ P
Sbjct: 93 VPSLVSIAP 101
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
I+ + + P++RVK +LQ++ + Y G VD RI +E G+ ++G
Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201
Query: 440 NVIRYFP 460
+R P
Sbjct: 202 TAMRDIP 208
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 607 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 750
PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G +A + V P++ +K+ LQ + K YK D F +I + +G+ +RG
Sbjct: 45 GSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGV 103
Query: 434 FANVIRYFPTQALNFA 481
++ P + F+
Sbjct: 104 TVPILNSIPNTTVLFS 119
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 275 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 287 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 460
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 414
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 414
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 414
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 414
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 368 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 643 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 521
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 392 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRSSG 541
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 680 RPENSRWPSPLPTSAARRVRAKSRGYTK 597
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 284 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 463
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 464 QALNF 478
Q L+F
Sbjct: 66 QTLHF 70
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 685 NCISKIFKSDGLIGLYRGFG 744
+C I++ +G+ G YRGFG
Sbjct: 332 DCFRTIYQQEGIFGFYRGFG 351
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 414
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 761 IPCTDTPKPLYRPIRPSDLKILLMQ 687
+PC P LYR +RP L+I + Q
Sbjct: 589 LPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 41 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 184
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,559,694
Number of Sequences: 59808
Number of extensions: 441028
Number of successful extensions: 1435
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -