Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00564
(754 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XZ56 Cluster: CG8846-PA; n=13; Endopterygota|Rep: CG8... 89 8e-17
UniRef50_A7SXX3 Cluster: Predicted protein; n=1; Nematostella ve... 80 7e-14
UniRef50_Q6NYL2 Cluster: Eukaryotic translation initiation facto... 75 1e-12
UniRef50_Q13542 Cluster: Eukaryotic translation initiation facto... 74 4e-12
UniRef50_Q56J88 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q98TT6 Cluster: Eukaryotic translation initiation facto... 69 1e-10
UniRef50_Q5DI71 Cluster: SJCHGC06694 protein; n=1; Schistosoma j... 66 1e-09
UniRef50_Q13541 Cluster: Eukaryotic translation initiation facto... 64 4e-09
UniRef50_Q9BG57 Cluster: Translation initiation factor 4E bindin... 63 8e-09
UniRef50_O60516 Cluster: Eukaryotic translation initiation facto... 62 2e-08
UniRef50_UPI0000EBE3E7 Cluster: PREDICTED: hypothetical protein;... 50 8e-05
UniRef50_Q9NDN6 Cluster: 4E-binding protein homolog; n=2; Dictyo... 45 0.002
UniRef50_Q7S5A6 Cluster: Predicted protein; n=2; Neurospora cras... 36 1.4
UniRef50_UPI0000F2B98A Cluster: PREDICTED: similar to Chromosome... 35 1.9
UniRef50_Q8UZB4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q6TUA4 Cluster: Furosemide-sensitive KCl cotransporter ... 34 4.3
UniRef50_UPI0000498ACD Cluster: Arf GTPase activating protein; n... 33 7.6
UniRef50_UPI00006A1E88 Cluster: UPI00006A1E88 related cluster; n... 33 7.6
UniRef50_P72605 Cluster: Slr1484 protein; n=1; Synechocystis sp.... 33 7.6
UniRef50_Q6UYJ3 Cluster: Conserved tail assembly protein; n=1; B... 33 7.6
UniRef50_Q8I339 Cluster: Putative uncharacterized protein PFI055... 33 7.6
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 33 10.0
UniRef50_A3ITJ3 Cluster: Serine/Threonine protein kinase; n=2; C... 33 10.0
UniRef50_A7QQL8 Cluster: Chromosome undetermined scaffold_143, w... 33 10.0
UniRef50_Q6CAG6 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 10.0
UniRef50_A7EZP5 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 10.0
>UniRef50_Q9XZ56 Cluster: CG8846-PA; n=13; Endopterygota|Rep:
CG8846-PA - Drosophila melanogaster (Fruit fly)
Length = 117
Score = 89.4 bits (212), Expect = 8e-17
Identities = 41/60 (68%), Positives = 54/60 (90%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 MSASPIARQATHSQSIP--SRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 251
MSASP ARQA +Q++P +R+V+I+DP QMP+VYSSTPGGT+YSTTPGGT+++YER+FM
Sbjct: 1 MSASPTARQAI-TQALPMITRKVVISDPIQMPEVYSSTPGGTLYSTTPGGTKLIYERAFM 59
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LRQSPISQTPPQCALPAALLKNPSSVP--NVQPASTQKPRSNSISFDESQETFSMDL 421
LR SP+SQTPP +P+ LL+ P P T+ + E QE F +DL
Sbjct: 62 LRGSPLSQTPPS-NVPSCLLRGTPRTPFRKCVPVPTELIKQTKSLKIEDQEQFQLDL 117
>UniRef50_A7SXX3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 117
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +3
Query: 78 MSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLP 257
M+ + R + +++IPSRRV + DP MP YS+TPGGTIYSTTPGGTRI+YER F+L
Sbjct: 1 MNGTQAERGSPLARAIPSRRVPVHDPNHMPSDYSTTPGGTIYSTTPGGTRIIYERKFLLE 60
Query: 258 FGN 266
N
Sbjct: 61 LRN 63
>UniRef50_Q6NYL2 Cluster: Eukaryotic translation initiation factor
4E binding protein 2; n=7; Euteleostomi|Rep: Eukaryotic
translation initiation factor 4E binding protein 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 113
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/53 (58%), Positives = 43/53 (81%)
Frame = +3
Query: 96 ARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFML 254
+RQ + S++IP+R VLI D Q+P Y +TPGGT++STTPGGTRI+Y+R F+L
Sbjct: 4 SRQLSESRAIPTRTVLINDSTQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLL 56
>UniRef50_Q13542 Cluster: Eukaryotic translation initiation factor
4E-binding protein 2; n=12; Amniota|Rep: Eukaryotic
translation initiation factor 4E-binding protein 2 -
Homo sapiens (Human)
Length = 120
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = +3
Query: 81 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFML 254
S++ Q + S++IP+R V I+D AQ+P Y +TPGGT++STTPGGTRI+Y+R F+L
Sbjct: 3 SSAGSGHQPSQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLL 60
>UniRef50_Q56J88 Cluster: Putative uncharacterized protein; n=1;
Adineta ricciae|Rep: Putative uncharacterized protein -
Adineta ricciae
Length = 114
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +3
Query: 108 THSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFML 254
++S+ IP RR++I DP MP Y TPGG+IYSTTPGGTRI Y+R+F+L
Sbjct: 2 SNSEGIPIRRLVINDPKDMPLHYGETPGGSIYSTTPGGTRIYYDRTFLL 50
>UniRef50_Q98TT6 Cluster: Eukaryotic translation initiation factor
4E-1A-binding protein; n=2; Euteleostomi|Rep: Eukaryotic
translation initiation factor 4E-1A-binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 112
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +3
Query: 102 QATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
Q + S IP+R + + D +Q+PD YS TPGGT++STTPGGTRI+Y+R F+L N
Sbjct: 6 QQSKSCPIPTRVLHLKDWSQLPDCYSQTPGGTLFSTTPGGTRIIYDRKFLLDCRN 60
>UniRef50_Q5DI71 Cluster: SJCHGC06694 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06694 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +3
Query: 123 IPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
+P ++V + D +Q+P +S+TPGGT++STTPGGTRI+YER F+L N
Sbjct: 9 VPIKKVTVRDLSQIPSNHSTTPGGTLFSTTPGGTRIIYERDFILSLRN 56
>UniRef50_Q13541 Cluster: Eukaryotic translation initiation factor
4E-binding protein 1; n=17; Deuterostomia|Rep:
Eukaryotic translation initiation factor 4E-binding
protein 1 - Homo sapiens (Human)
Length = 118
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
Frame = +3
Query: 108 THSQSIPS-RRVLITDPAQMPDV-YSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
T S++IP+ RRV++ D Q+P YS+TPGGT++STTPGGTRI+Y+R F++ N
Sbjct: 10 TPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLMECRN 64
>UniRef50_Q9BG57 Cluster: Translation initiation factor 4E binding
protein 1; n=3; Euteleostomi|Rep: Translation initiation
factor 4E binding protein 1 - Sus scrofa (Pig)
Length = 102
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/53 (54%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = +3
Query: 114 SQSIPS-RRVLITDPAQMPDV-YSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
S++IP+ RRV++ D Q+P YS+TPGGT++STTPGGTRI+Y+R F++ N
Sbjct: 2 SRAIPTTRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLMECRN 54
>UniRef50_O60516 Cluster: Eukaryotic translation initiation factor
4E-binding protein 3; n=6; Euteleostomi|Rep: Eukaryotic
translation initiation factor 4E-binding protein 3 -
Homo sapiens (Human)
Length = 100
Score = 61.7 bits (143), Expect = 2e-08
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3
Query: 159 QMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
Q+PD YS+TPGGT+Y+TTPGGTRI+Y+R F+L N
Sbjct: 15 QLPDCYSTTPGGTLYATTPGGTRIIYDRKFLLECKN 50
>UniRef50_UPI0000EBE3E7 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 272
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +3
Query: 108 THSQSIPS-RRVLITDPAQMPDV-YSSTPGGTIYSTTPGGTR 227
T S++IP+ RRV++ D Q+P YS+TPGGT++STTPGG R
Sbjct: 10 TPSRAIPTTRRVVLADGVQLPPGDYSTTPGGTLFSTTPGGRR 51
>UniRef50_Q9NDN6 Cluster: 4E-binding protein homolog; n=2;
Dictyostelium discoideum|Rep: 4E-binding protein homolog
- Dictyostelium discoideum (Slime mold)
Length = 103
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +3
Query: 174 YSSTPGGTIYSTTPGGTRIVYERSFMLPFGN 266
+S++ GGT+Y TTPGGT+IVY+R+ +L + N
Sbjct: 19 FSTSLGGTLYGTTPGGTKIVYDRNALLQYRN 49
>UniRef50_Q7S5A6 Cluster: Predicted protein; n=2; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 350
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 56 NTTKVFNNVSVTYREAG-HSQPIDSFKEGPDHGSRSNA*CLFQHTGRNHLLNYSWRYKNS 232
N K++ N + A HS+P SF++GP + ++ L H H L Y++ +S
Sbjct: 160 NPAKLWTNTAAAAAAANIHSRPSGSFQKGPQDPAGHSSPFLTTHI---HTLTYTYIIHSS 216
Query: 233 VREVVHVTLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNS 379
+ +TL SP++ T + + P VP P T +N+
Sbjct: 217 HPLTLTLTLTWSPLAPTIVGNCFGNPVSRIPYPVPTRCPRGTSVGNNNN 265
>UniRef50_UPI0000F2B98A Cluster: PREDICTED: similar to Chromosome 16
open reading frame 77; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Chromosome 16 open reading frame
77 - Monodelphis domestica
Length = 252
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 284 PPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSMDL 421
PPQCA PA LL + S+ P + PRS + D S++T S L
Sbjct: 191 PPQCAGPATLLYH-SAQAQTSPVGERAPRSPQVEADPSRKTSSSRL 235
>UniRef50_Q8UZB4 Cluster: Putative uncharacterized protein; n=1;
Grapevine fleck virus|Rep: Putative uncharacterized
protein - Grapevine fleck virus
Length = 309
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 263 QSPISQTPPQCALPAALLKNPSSVPNVQPASTQ-KPRSNSI 382
++P TPP C P AL +PS VP PAS KP SN +
Sbjct: 4 RAPSPPTPP-CPSPPALKSSPSPVPTATPASPPLKPLSNPL 43
>UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1;
Streptomyces phage VWB|Rep: Putative uncharacterized
protein - Streptomyces phage VWB
Length = 1440
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 54 LTPRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPD 170
LTP+ L+ SA +A A S+P+RR +I PA P+
Sbjct: 1358 LTPKPTLLSSAPKLAATAAVQASMPARRAVIPSPAPRPE 1396
>UniRef50_Q6TUA4 Cluster: Furosemide-sensitive KCl cotransporter 3;
n=2; Tetrapoda|Rep: Furosemide-sensitive KCl
cotransporter 3 - Rattus norvegicus (Rat)
Length = 118
Score = 33.9 bits (74), Expect = 4.3
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 209 YSWRYKNSVREVVHVTLRQSPISQTPPQCALPAALLKNPSSVPNVQPAS-TQKPRSNSIS 385
YS R + S RE V T R P+S+ A + +PSS P T+ P NSI+
Sbjct: 28 YSSRVRFSSRESVPETSRSEPMSELSGATTSLATVALDPSSDRTSNPQDVTEDPNQNSIT 87
Query: 386 FDESQ 400
+ SQ
Sbjct: 88 GEHSQ 92
>UniRef50_UPI0000498ACD Cluster: Arf GTPase activating protein; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: Arf GTPase
activating protein - Entamoeba histolytica HM-1:IMSS
Length = 754
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 272 ISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQE 403
I+QTP A S++P QPAS K R+N+ +FD+ ++
Sbjct: 389 ITQTPLSKPQTAETFDFNSTIPKSQPASVIKSRTNAFNFDQPKQ 432
>UniRef50_UPI00006A1E88 Cluster: UPI00006A1E88 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A1E88 UniRef100 entry -
Xenopus tropicalis
Length = 293
Score = 33.1 bits (72), Expect = 7.6
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 242 VVHVTLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 385
V V L SP+SQ PP + + + S VP V P S+ P+ S S
Sbjct: 161 VPQVPLTSSPVSQVPPTSSPVSQVPPKSSPVPQVPPTSSPVPQVPSTS 208
>UniRef50_P72605 Cluster: Slr1484 protein; n=1; Synechocystis sp.
PCC 6803|Rep: Slr1484 protein - Synechocystis sp.
(strain PCC 6803)
Length = 532
Score = 33.1 bits (72), Expect = 7.6
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 233 VREVVHVTLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQ 400
V + V L Q+ I P +LP+ +++NP S+PN P P N++S Q
Sbjct: 95 VTQAVLPPLPQAIIPPVPSVNSLPSPVVENPISLPNSLPPPPAAPVPNAVSLPVDQ 150
>UniRef50_Q6UYJ3 Cluster: Conserved tail assembly protein; n=1;
Burkholderia phage BcepNazgul|Rep: Conserved tail
assembly protein - Burkholderia phage BcepNazgul
Length = 208
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 51 KLTPRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYST 209
K PR L +A A+ A +I R +LI+DP +PD +S G T+ +T
Sbjct: 142 KDNPRNILNQTAKNAAQAAKQPMTI--RNMLISDPNFVPDAMASAAGDTVITT 192
>UniRef50_Q8I339 Cluster: Putative uncharacterized protein PFI0550w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0550w - Plasmodium falciparum
(isolate 3D7)
Length = 3303
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +3
Query: 573 CLTGHHFLFRSLVAL*KLNSLTVILLLFLWIIIECFIVCVSKY-----GFWFRQITLFSL 737
C G+ F + + + N++T ++LLFL II CFI+ + Y GF+ R I +
Sbjct: 2364 CAKGYTNSFMTSLCVKCPNNITNMILLFLIYIIFCFIIIIISYLNITSGFYRRSIHSIVI 2423
Query: 738 LLGI 749
+G+
Sbjct: 2424 KIGV 2427
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.7 bits (71), Expect = 10.0
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 263 QSPISQT-PPQCALPAALLKNPSS--VPNVQPASTQKPRSNS 379
Q P+ Q+ PP ALP +L+ NP S P+VQ Q P +S
Sbjct: 411 QDPLQQSKPPNLALPPSLMNNPLSPDAPSVQSRVMQPPLQSS 452
>UniRef50_A3ITJ3 Cluster: Serine/Threonine protein kinase; n=2;
Chroococcales|Rep: Serine/Threonine protein kinase -
Cyanothece sp. CCY 0110
Length = 644
Score = 32.7 bits (71), Expect = 10.0
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +2
Query: 206 NYSWRYKNSVREVVHVTLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSN 376
N S RY S EV+ V SP TPP + +A++ SS PNV + QK N
Sbjct: 273 NPSDRY-TSATEVIQVLTHSSPQPITPPTLMVKSAIMPQTSS-PNVTVSPKQKIEQN 327
>UniRef50_A7QQL8 Cluster: Chromosome undetermined scaffold_143,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_143, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1088
Score = 32.7 bits (71), Expect = 10.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 483 GKLANVSLACLLDVCGLF-VKLARAKHNKKTCLTGHHFLFRSLVAL*KLNSLTVILLLFL 659
G NVS + L+ GL K + NK H F + L+ L L SL V+LLL
Sbjct: 686 GIFKNVSASSLVGNPGLCGTKFLGSCRNKSHLAASHRFSKKGLLILGVLGSLIVLLLLTF 745
Query: 660 WIIIEC 677
+II C
Sbjct: 746 SVIIFC 751
>UniRef50_Q6CAG6 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 430
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 269 PISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 385
P S+ P + +P+A L+N +VP PAS RS++ S
Sbjct: 271 PFSRRPARAMVPSAQLRNKENVPRPAPASVTPVRSSTPS 309
>UniRef50_A7EZP5 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 1351
Score = 32.7 bits (71), Expect = 10.0
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 54 LTPRK-FLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRI 230
L+P++ F P+ +A + + + +TDP + TPG Y+ TP
Sbjct: 420 LSPKRLFSAQPTDPVPAEANNGLMLRTNHPSVTDPGKYGSF--QTPGAVPYNLTPSPAGS 477
Query: 231 VYERSFMLPFGNLRFPKR 284
V E+ + P+ R P R
Sbjct: 478 VQEKDYYKPYHG-RSPSR 494
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,743,205
Number of Sequences: 1657284
Number of extensions: 15863410
Number of successful extensions: 44589
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 42332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44546
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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