Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00563
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   3.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.5  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 219 LSVERLQFHQHEN*PQHLPFVKHH 148
           + +  L  HQH +   HLP V+ H
Sbjct: 111 MKINLLNHHQHHHQHPHLPHVQQH 134


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 42  DKFGNVAIMRLPQSV---SDDVDEDPTGNKALWDRGLL 146
           ++ G++AI+  P S    S     D TGN A+W  G +
Sbjct: 24  EEIGDIAIVSEPYSAPTGSSSWVADKTGNAAIWVTGTI 61


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 341  MRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQ 469
            MR E    C +D  S  S  Y V N I+      FN+ + GKQ
Sbjct: 3007 MRFECCIDCSQDASSITSNSYKVTNWINEIFEHFFNTANQGKQ 3049


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 127 SALFPVGSSSTSSLTDCGNRIIATLPNLSDTAIVS*SRI 11
           S + P+G S  S +TDC       L N+S+ ++    RI
Sbjct: 30  SLMVPIGHSQ-SVITDCDTSKCQPLSNISEVSLEPGQRI 67


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 341  MRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQ 469
            MR E    C +D  S  S  Y V N I+      FN+ + GKQ
Sbjct: 3010 MRLEYCIDCSQDASSITSKSYKVTNWINEIFEHFFNTENQGKQ 3052


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,202
Number of Sequences: 2352
Number of extensions: 12836
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)