Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00563
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 155 9e-38
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 155 9e-38
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 155 9e-38
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 155 9e-38
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 155 9e-38
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 155 9e-38
AK131415-1|BAD18562.1| 803|Homo sapiens protein ( Homo sapiens ... 33 1.1
DQ181796-1|ABA10330.1| 834|Homo sapiens NEDD4L variant protein. 31 2.5
BC032597-1|AAH32597.1| 911|Homo sapiens NEDD4L protein protein. 31 2.5
BC019345-1|AAH19345.1| 855|Homo sapiens Unknown (protein for IM... 31 2.5
BC000621-1|AAH00621.2| 855|Homo sapiens NEDD4L protein protein. 31 2.5
AY312514-1|AAP75706.1| 975|Homo sapiens NEDD4.2 protein. 31 2.5
AY112985-1|AAM76730.1| 947|Homo sapiens ubiquitin ligase NEDD4h... 31 2.5
AY112984-1|AAM76729.1| 967|Homo sapiens ubiquitin ligase NEDD4g... 31 2.5
AY112983-1|AAM76728.1| 854|Homo sapiens ubiquitin ligase NEDD4f... 31 2.5
AL137469-1|CAB70754.1| 820|Homo sapiens hypothetical protein pr... 31 2.5
AF385931-1|AAM46208.1| 854|Homo sapiens ubiquitin ligase NEDD4L... 31 2.5
AF210730-1|AAG43524.1| 854|Homo sapiens NEDD4La protein. 31 2.5
AB071179-1|BAB69424.1| 955|Homo sapiens NEDD4-like ubiquitin li... 31 2.5
AB007899-1|BAA23711.1| 995|Homo sapiens KIAA0439 protein. 31 2.5
BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein. 31 4.3
AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open readi... 31 4.3
AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens ... 31 4.3
U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylat... 30 5.7
BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenyl... 30 5.7
AB046744-1|BAB21613.1| 216|Homo sapiens polyadenylation specifi... 30 5.7
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 1152 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 1211
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 1212 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 1245
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1073 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1132
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 1133 VGETVLSLQKTTLIPGGSESLVYTTLSG 1160
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 298 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 357
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 358 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 1175
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 1176 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 1209
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1037 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1096
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 1097 VGETVLSLQKTTLIPGGSESLVYTTLSG 1124
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 298 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 357
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 358 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 298 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 357
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 358 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 391
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 219 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 278
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 279 VGETVLSLQKTTLIPGGSESLVYTTLSG 306
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 155 bits (377), Expect = 9e-38
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 245 STTNATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 424
S T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVID
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 1175
Query: 425 GDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
GDLCEQFNS++P KQK ++ +L+RTP E K L+
Sbjct: 1176 GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 1209
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 9 SILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFH 188
S+LDYDT+A +DKFGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+H
Sbjct: 1037 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1096
Query: 189 VGETVTSLQRATLIPGGSEALLMQQLVG 272
VGETV SLQ+ TLIPGGSE+L+ L G
Sbjct: 1097 VGETVLSLQKTTLIPGGSESLVYTTLSG 1124
>AK131415-1|BAD18562.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ16525 fis, clone OCBBF2005433, weakly similar
to N-CHIMAERIN. ).
Length = 803
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 253 SSASEPPGINVALCREVTVSPT*KLTTTSPFCEAPLSKPLSQSALFPVGSSSTS 92
+S+ +PP + +CR V+ + PF E P + LSQ L P S+ST+
Sbjct: 206 ASSEQPPPLPRKMCRSVSTDNL-SPSLLKPFQEGPSGRSLSQENLPPEASASTA 258
>DQ181796-1|ABA10330.1| 834|Homo sapiens NEDD4L variant protein.
Length = 834
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 557 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 615
Query: 512 QKNLK 526
+LK
Sbjct: 616 YNSLK 620
>BC032597-1|AAH32597.1| 911|Homo sapiens NEDD4L protein protein.
Length = 911
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 634 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 692
Query: 512 QKNLK 526
+LK
Sbjct: 693 YNSLK 697
>BC019345-1|AAH19345.1| 855|Homo sapiens Unknown (protein for
IMAGE:3604024) protein.
Length = 855
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 578 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 636
Query: 512 QKNLK 526
+LK
Sbjct: 637 YNSLK 641
>BC000621-1|AAH00621.2| 855|Homo sapiens NEDD4L protein protein.
Length = 855
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 578 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 636
Query: 512 QKNLK 526
+LK
Sbjct: 637 YNSLK 641
>AY312514-1|AAP75706.1| 975|Homo sapiens NEDD4.2 protein.
Length = 975
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 698 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 756
Query: 512 QKNLK 526
+LK
Sbjct: 757 YNSLK 761
>AY112985-1|AAM76730.1| 947|Homo sapiens ubiquitin ligase NEDD4h
protein.
Length = 947
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 670 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 728
Query: 512 QKNLK 526
+LK
Sbjct: 729 YNSLK 733
>AY112984-1|AAM76729.1| 967|Homo sapiens ubiquitin ligase NEDD4g
protein.
Length = 967
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 690 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 748
Query: 512 QKNLK 526
+LK
Sbjct: 749 YNSLK 753
>AY112983-1|AAM76728.1| 854|Homo sapiens ubiquitin ligase NEDD4f
protein.
Length = 854
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 577 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 635
Query: 512 QKNLK 526
+LK
Sbjct: 636 YNSLK 640
>AL137469-1|CAB70754.1| 820|Homo sapiens hypothetical protein
protein.
Length = 820
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 543 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 601
Query: 512 QKNLK 526
+LK
Sbjct: 602 YNSLK 606
>AF385931-1|AAM46208.1| 854|Homo sapiens ubiquitin ligase NEDD4Lb
protein.
Length = 854
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 577 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 635
Query: 512 QKNLK 526
+LK
Sbjct: 636 YNSLK 640
>AF210730-1|AAG43524.1| 854|Homo sapiens NEDD4La protein.
Length = 854
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 577 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 635
Query: 512 QKNLK 526
+LK
Sbjct: 636 YNSLK 640
>AB071179-1|BAB69424.1| 955|Homo sapiens NEDD4-like ubiquitin
ligase 3 protein.
Length = 955
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 678 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 736
Query: 512 QKNLK 526
+LK
Sbjct: 737 YNSLK 741
>AB007899-1|BAA23711.1| 995|Homo sapiens KIAA0439 protein.
Length = 995
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 353 NSPLCGRDHLSFRSYYYPVK-------NVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEY 511
NS LC DHLS+ ++ V ++DG F + GKQ + D+E +EY
Sbjct: 718 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITL-NDMESVDSEY 776
Query: 512 QKNLK 526
+LK
Sbjct: 777 YNSLK 781
>BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 156 SQKGDVVVNFHVGETVTSLQRATLIP 233
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open reading
frame 22 protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 156 SQKGDVVVNFHVGETVTSLQRATLIP 233
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens
cDNA FLJ44315 fis, clone TRACH3000014. ).
Length = 976
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 156 SQKGDVVVNFHVGETVTSLQRATLIP 233
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylation
specificity factor protein.
Length = 1442
Score = 30.3 bits (65), Expect = 5.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 257 ATISGSLGVLLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKNV 418
AT+ G +G+LLP + Q+ M ++ L R H+ R+ V+NV
Sbjct: 1338 ATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNV 1397
Query: 419 IDGDLCEQFNSLDPGKQKAIAGDLERTP 502
+DG+L ++ L ++ +A + TP
Sbjct: 1398 LDGELLNRYLYLSTMERSELAKKIGTTP 1425
>BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenylation
specific factor 1, 160kDa protein.
Length = 1443
Score = 30.3 bits (65), Expect = 5.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 257 ATISGSLGVLLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKNV 418
AT+ G +G+LLP + Q+ M ++ L R H+ R+ V+NV
Sbjct: 1339 ATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNV 1398
Query: 419 IDGDLCEQFNSLDPGKQKAIAGDLERTP 502
+DG+L ++ L ++ +A + TP
Sbjct: 1399 LDGELLNRYLYLSTMERSELAKKIGTTP 1426
>AB046744-1|BAB21613.1| 216|Homo sapiens polyadenylation
specificity factor protein.
Length = 216
Score = 30.3 bits (65), Expect = 5.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 257 ATISGSLGVLLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKNV 418
AT+ G +G+LLP + Q+ M ++ L R H+ R+ V+NV
Sbjct: 112 ATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNV 171
Query: 419 IDGDLCEQFNSLDPGKQKAIAGDLERTP 502
+DG+L ++ L ++ +A + TP
Sbjct: 172 LDGELLNRYLYLSTMERSELAKKIGTTP 199
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,965,129
Number of Sequences: 237096
Number of extensions: 1851367
Number of successful extensions: 7950
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7950
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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