Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00563
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro...   146   2e-35
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro...   146   2e-35
AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p pro...   146   2e-35
AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB...   146   2e-35
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA...   146   2e-35
S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.       30   2.9  
M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain pro...    30   2.9  
M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.     30   2.9  
AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p pro...    30   2.9  
AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA...    30   2.9  
AF160882-1|AAD46823.1|  428|Drosophila melanogaster GH12068p pro...    29   3.8  
AF145305-1|AAF08386.1|  428|Drosophila melanogaster 26S proteaso...    29   3.8  
AE014297-3377|AAF56177.1|  428|Drosophila melanogaster CG10370-P...    29   3.8  
AF134402-1|AAD24194.1|  431|Drosophila melanogaster Tat-binding ...    28   8.9  

>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
          Length = 1227

 Score =  146 bits (355), Expect = 2e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +2

Query: 257  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 436
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 437  EQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  140 bits (338), Expect = 2e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +3

Query: 6    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 185
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 186  HVGETVTSLQRATLIPGGSEALLMQQLVGLLAFY 287
            HVGE + SLQ+ATLIPGGSEAL+   L G +  +
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAF 1139


>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
          Length = 1227

 Score =  146 bits (355), Expect = 2e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +2

Query: 257  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 436
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 437  EQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  140 bits (338), Expect = 2e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +3

Query: 6    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 185
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 186  HVGETVTSLQRATLIPGGSEALLMQQLVGLLAFY 287
            HVGE + SLQ+ATLIPGGSEAL+   L G +  +
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAF 1139


>AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p
           protein.
          Length = 688

 Score =  146 bits (355), Expect = 2e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +2

Query: 257 ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 436
           AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 591 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 650

Query: 437 EQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
           EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 651 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 680



 Score =  140 bits (338), Expect = 2e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +3

Query: 6   TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 185
           T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 507 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 566

Query: 186 HVGETVTSLQRATLIPGGSEALLMQQLVGLLAFY 287
           HVGE + SLQ+ATLIPGGSEAL+   L G +  +
Sbjct: 567 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAF 600


>AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB,
           isoform B protein.
          Length = 688

 Score =  146 bits (355), Expect = 2e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +2

Query: 257 ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 436
           AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 591 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 650

Query: 437 EQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
           EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 651 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 680



 Score =  140 bits (338), Expect = 2e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +3

Query: 6   TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 185
           T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 507 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 566

Query: 186 HVGETVTSLQRATLIPGGSEALLMQQLVGLLAFY 287
           HVGE + SLQ+ATLIPGGSEAL+   L G +  +
Sbjct: 567 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAF 600


>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
            isoform A protein.
          Length = 1227

 Score =  146 bits (355), Expect = 2e-35
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = +2

Query: 257  ATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLC 436
            AT+SG++G  +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS YYPVKNV+DGDLC
Sbjct: 1130 ATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLC 1189

Query: 437  EQFNSLDPGKQKAIAGDLERTPAEYQKNLK 526
            EQ+ S++  KQK+IAGD+ RTP +  K L+
Sbjct: 1190 EQYLSIEAAKQKSIAGDMFRTPNQICKKLE 1219



 Score =  140 bits (338), Expect = 2e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +3

Query: 6    TSILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNF 185
            T++LDYDTIA++DKFGN++I RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +F
Sbjct: 1046 TTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSF 1105

Query: 186  HVGETVTSLQRATLIPGGSEALLMQQLVGLLAFY 287
            HVGE + SLQ+ATLIPGGSEAL+   L G +  +
Sbjct: 1106 HVGEIIMSLQKATLIPGGSEALIYATLSGTVGAF 1139


>S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 276 RDPLIVALVVLQNHQELMLLSVERLQFHQHEN*PQHLPFVKHH 148
           R PL  AL +     +  L+S++    H H N P HL  + HH
Sbjct: 77  RSPLSPALSLSHQQAKRQLMSLQPHPAHHHHN-PHHLNHLNHH 118


>M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain
           protein protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 276 RDPLIVALVVLQNHQELMLLSVERLQFHQHEN*PQHLPFVKHH 148
           R PL  AL +     +  L+S++    H H N P HL  + HH
Sbjct: 77  RSPLSPALSLSHQQAKRQLMSLQPHPAHHHHN-PHHLNHLNHH 118


>M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 276 RDPLIVALVVLQNHQELMLLSVERLQFHQHEN*PQHLPFVKHH 148
           R PL  AL +     +  L+S++    H H N P HL  + HH
Sbjct: 77  RSPLSPALSLSHQQAKRQLMSLQPHPAHHHHN-PHHLNHLNHH 118


>AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p
           protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 276 RDPLIVALVVLQNHQELMLLSVERLQFHQHEN*PQHLPFVKHH 148
           R PL  AL +     +  L+S++    H H N P HL  + HH
Sbjct: 77  RSPLSPALSLSHQQAKRQLMSLQPHPAHHHHN-PHHLNHLNHH 118


>AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA
           protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 276 RDPLIVALVVLQNHQELMLLSVERLQFHQHEN*PQHLPFVKHH 148
           R PL  AL +     +  L+S++    H H N P HL  + HH
Sbjct: 77  RSPLSPALSLSHQQAKRQLMSLQPHPAHHHHN-PHHLNHLNHH 118


>AF160882-1|AAD46823.1|  428|Drosophila melanogaster GH12068p
           protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +2

Query: 389 RSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLKTFELDMR 547
           ++Y+ PV  ++D +  +  + +   K   +   LE  PAEY   +K  E+D R
Sbjct: 119 QAYFLPVIGLVDAEKLKPGDLVGVNKDSYLI--LETLPAEYDARVKAMEVDER 169


>AF145305-1|AAF08386.1|  428|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p50 protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +2

Query: 389 RSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLKTFELDMR 547
           ++Y+ PV  ++D +  +  + +   K   +   LE  PAEY   +K  E+D R
Sbjct: 119 QAYFLPVIGLVDAEKLKPGDLVGVNKDSYLI--LETLPAEYDARVKAMEVDER 169


>AE014297-3377|AAF56177.1|  428|Drosophila melanogaster CG10370-PA
           protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +2

Query: 389 RSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEYQKNLKTFELDMR 547
           ++Y+ PV  ++D +  +  + +   K   +   LE  PAEY   +K  E+D R
Sbjct: 119 QAYFLPVIGLVDAEKLKPGDLVGVNKDSYLI--LETLPAEYDARVKAMEVDER 169


>AF134402-1|AAD24194.1|  431|Drosophila melanogaster Tat-binding
           protein-1 protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +2

Query: 389 RSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGD----LERTPAEYQKNLKTFELDMR 547
           ++Y+ PV  ++D +       L PG    +  D    LE  PAEY   +K  E+D R
Sbjct: 123 QAYFLPVIGLVDAE------KLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDER 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,515,252
Number of Sequences: 53049
Number of extensions: 570738
Number of successful extensions: 1377
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)