Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00556
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 157 1e-40
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 157 1e-40
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 157 bits (380), Expect = 1e-40
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 437 ANVIRYFPTQALNFAFKDKYKQVF 508
ANVIRYFPTQALNFAFKDKYKQVF
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVF 101
Score = 126 bits (304), Expect = 2e-31
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = +1
Query: 520 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 699
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 700 IFKSDGLIGLYRGFGVSVQGI 762
IFK+DG+ GLYRGFGVSVQGI
Sbjct: 166 IFKADGITGLYRGFGVSVQGI 186
Score = 33.5 bits (73), Expect = 0.002
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 207 MSNLADPVAFAKDFLA 254
MS LADPVAFAKDFLA
Sbjct: 1 MSGLADPVAFAKDFLA 16
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 293 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 451
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 24.2 bits (50), Expect = 1.4
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K ++ + G+ + +I K G+ +RG
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 437 ANVIRYFPTQALNFAFKD 490
+V +A F F D
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 157 bits (380), Expect = 1e-40
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 437 ANVIRYFPTQALNFAFKDKYKQVF 508
ANVIRYFPTQALNFAFKDKYKQVF
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVF 101
Score = 126 bits (304), Expect = 2e-31
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = +1
Query: 520 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 699
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 700 IFKSDGLIGLYRGFGVSVQGI 762
IFK+DG+ GLYRGFGVSVQGI
Sbjct: 166 IFKADGITGLYRGFGVSVQGI 186
Score = 33.5 bits (73), Expect = 0.002
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 207 MSNLADPVAFAKDFLA 254
MS LADPVAFAKDFLA
Sbjct: 1 MSGLADPVAFAKDFLA 16
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 604 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 738
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 293 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 451
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 24.2 bits (50), Expect = 1.4
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K ++ + G+ + +I K G+ +RG
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 437 ANVIRYFPTQALNFAFKD 490
+V +A F F D
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,630
Number of Sequences: 438
Number of extensions: 3960
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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