Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00555
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    27   0.66 
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   2.7  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    25   2.7  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    25   2.7  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    25   2.7  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    25   2.7  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   2.7  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    25   2.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.7  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    25   2.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.1  

>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+  S +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHSTDCDKFLICNHGTPVV------SKCPP 58


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 672 ARRSFSGLPGPLGQGEHADSFSVARV 595
           A RS S L  PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SQCPP 58


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 699 GDNCKPQSPARRSFSGLPGPLG 634
           G  C P+  A +   GLPGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 QAPLLVVPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 172
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 265  QEWSLRLNLTQHGKYHQARTPEG 333
            Q+W +R N     +  + RTP+G
Sbjct: 1912 QQWEVRYNYDNANRLIRKRTPDG 1934


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 867,455
Number of Sequences: 2352
Number of extensions: 18864
Number of successful extensions: 39
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)