Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00555
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.         33   1.2  
AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens ...    31   4.7  
AY128689-1|AAM97540.1| 1192|Homo sapiens PI 3-kinase enhancer lo...    30   8.2  

>BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.
          Length = 535

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 184 SGKPKILDSGGSMVAKLKLKGIDGGHHQEWSLRLNLTQHGKYH 312
           S +P++L SGGS  +   + GI G HH    + + L + G +H
Sbjct: 391 SRRPRLLGSGGSPASASLVAGITGAHHHAQLIFVFLVEMGFHH 433


>AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43200 fis, clone FEBRA2007793. ).
          Length = 188

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = +2

Query: 149 PPTLLQWLGGQLPGNQRFWTPGGVWLQS*NLKELTEGTTRSGACGL 286
           P T L W GGQ    Q    P G W  S N +       R G CGL
Sbjct: 13  PETPLSWPGGQRSTLQE--PPRGRWATSPNKRHTRRPLARGGICGL 56


>AY128689-1|AAM97540.1| 1192|Homo sapiens PI 3-kinase enhancer long
           isoform protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 281 RRLHSWWCPPSIPLSFSFATILPPESKIFGFPEAARRAIV 162
           RRL  W  PP  PLS      L P+SK  G P ++RR ++
Sbjct: 110 RRLSLWAAPPGPPLSGG----LSPDSKPGGAPSSSRRPLL 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,466,102
Number of Sequences: 237096
Number of extensions: 3133634
Number of successful extensions: 7157
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7156
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)