Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00554
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    27   0.13 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.53 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.53 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 467 IQQCFQNDLVLVLEHH-WVQIYLLEHNQIRTENQIFYF 577
           ++QC+    + V +   ++ +  LEHN IR +N + YF
Sbjct: 114 VKQCYHLQKINVQQSGIFINLPFLEHNLIRLKNCVIYF 151


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 340 FS*SHYLFTNFIFII-IGTCSSPLNAIFTSFSIKPIPSKTLVISYILRFCLTANKLVA 170
           FS    ++ + IF++ IG   + LN++      KP+P    ++   L +C     L +
Sbjct: 238 FSIFGLVWISLIFVVLIGDAYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLAS 295


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 340 FS*SHYLFTNFIFII-IGTCSSPLNAIFTSFSIKPIPSKTLVISYILRFCLTANKLVA 170
           FS    ++ + IF++ IG   + LN++      KP+P    ++   L +C     L +
Sbjct: 238 FSIFGLVWISLIFVVLIGDAYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLAS 295


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = +2

Query: 509 HHWVQIYLLEHNQIRTENQIFYFTLNHQNQWG 604
           + W +++L+EH  ++T   +     N+    G
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAEG 187


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = +2

Query: 509 HHWVQIYLLEHNQIRTENQIFYFTLNHQNQWG 604
           + W +++L+EH  ++T   +     N+    G
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAEG 187


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -1

Query: 344 IVFLIPLPFYQFHFYHNRDLLLSIECYFYFF 252
           I+F +      ++FY+   +LL +  ++Y F
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFYYAF 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,378
Number of Sequences: 336
Number of extensions: 3606
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)