Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00554
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.         76   7e-14
U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.    76   7e-14
BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p pro...    76   7e-14
AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC...    76   7e-14
AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB...    76   7e-14
AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA...    76   7e-14
AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.       76   7e-14
AY069118-1|AAL39263.1|  370|Drosophila melanogaster GH13089p pro...    68   1e-11
AE014134-3344|AAF53965.1|  370|Drosophila melanogaster CG1071-PA...    68   1e-11
AB016824-1|BAA33742.1|  370|Drosophila melanogaster E2F-like tra...    68   1e-11
AY051641-1|AAK93065.1|  585|Drosophila melanogaster GM14014p pro...    31   2.4  
AE014298-739|AAN09138.1|  585|Drosophila melanogaster CG3249-PB,...    31   2.4  
AE014298-738|AAF46032.2|  585|Drosophila melanogaster CG3249-PA,...    31   2.4  
AE014298-737|AAN09139.2|  607|Drosophila melanogaster CG3249-PC,...    31   2.4  

>X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p
           protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC,
           isoform C protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB,
           isoform B protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA,
           isoform A protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 84  RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKEVK 263
           R + SLG+LT KFV LLQ++ DGV+DL  A+N L V QKRRIYDITNVLEGI ++EK+ K
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHV-QKRRIYDITNVLEGINILEKKSK 312


>AY069118-1|AAL39263.1|  370|Drosophila melanogaster GH13089p
           protein.
          Length = 370

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 96  SLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEK 254
           SL LLT KFV L+ KA +G +DLK AT +L V QKRRIYDITNVLEGIGLI+K
Sbjct: 77  SLVLLTQKFVDLV-KANEGSIDLKAATKILDV-QKRRIYDITNVLEGIGLIDK 127


>AE014134-3344|AAF53965.1|  370|Drosophila melanogaster CG1071-PA
           protein.
          Length = 370

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 96  SLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEK 254
           SL LLT KFV L+ KA +G +DLK AT +L V QKRRIYDITNVLEGIGLI+K
Sbjct: 77  SLVLLTQKFVDLV-KANEGSIDLKAATKILDV-QKRRIYDITNVLEGIGLIDK 127


>AB016824-1|BAA33742.1|  370|Drosophila melanogaster E2F-like
           transcription factor(E2F2) protein.
          Length = 370

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 96  SLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEK 254
           SL LLT KFV L+ KA +G +DLK AT +L V QKRRIYDITNVLEGIGLI+K
Sbjct: 77  SLVLLTQKFVDLV-KANEGSIDLKAATKILDV-QKRRIYDITNVLEGIGLIDK 127


>AY051641-1|AAK93065.1|  585|Drosophila melanogaster GM14014p
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 392 WIKQSTKNVLDEPDNQDMCFVMDTEIQQCFQ 484
           W ++  KN LD+PD++D   + D+ I+   Q
Sbjct: 23  WFRRRYKNCLDKPDDEDSSAINDSSIEPTVQ 53


>AE014298-739|AAN09138.1|  585|Drosophila melanogaster CG3249-PB,
           isoform B protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 392 WIKQSTKNVLDEPDNQDMCFVMDTEIQQCFQ 484
           W ++  KN LD+PD++D   + D+ I+   Q
Sbjct: 23  WFRRRYKNCLDKPDDEDSSAINDSSIEPTVQ 53


>AE014298-738|AAF46032.2|  585|Drosophila melanogaster CG3249-PA,
           isoform A protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 392 WIKQSTKNVLDEPDNQDMCFVMDTEIQQCFQ 484
           W ++  KN LD+PD++D   + D+ I+   Q
Sbjct: 23  WFRRRYKNCLDKPDDEDSSAINDSSIEPTVQ 53


>AE014298-737|AAN09139.2|  607|Drosophila melanogaster CG3249-PC,
           isoform C protein.
          Length = 607

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 392 WIKQSTKNVLDEPDNQDMCFVMDTEIQQCFQ 484
           W ++  KN LD+PD++D   + D+ I+   Q
Sbjct: 45  WFRRRYKNCLDKPDDEDSSAINDSSIEPTVQ 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,313,765
Number of Sequences: 53049
Number of extensions: 550961
Number of successful extensions: 1056
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)