Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00553
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 152 1e-35
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 144 3e-33
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 137 3e-31
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 132 1e-29
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 130 4e-29
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 124 3e-27
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 124 3e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 116 5e-25
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 109 8e-23
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 107 3e-22
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 106 6e-22
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 106 7e-22
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 103 5e-21
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 101 3e-20
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 100 8e-20
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 92 1e-17
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 90 7e-17
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 89 2e-16
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 88 3e-16
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 87 4e-16
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 87 6e-16
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 85 1e-15
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 85 3e-15
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 84 4e-15
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 82 2e-14
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 81 4e-14
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 80 7e-14
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 76 9e-13
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 75 2e-12
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 72 2e-11
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 72 2e-11
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 69 1e-10
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 67 5e-10
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 66 1e-09
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 7e-09
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 54 5e-06
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 53 7e-06
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 52 2e-05
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 51 4e-05
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 44 0.003
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 43 0.008
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.013
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 41 0.031
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 40 0.054
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 40 0.054
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 40 0.072
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 39 0.12
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;... 38 0.22
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.22
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 38 0.22
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 38 0.22
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 37 0.50
UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1; ... 36 0.88
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 35 2.0
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 35 2.7
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 35 2.7
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 3.6
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 34 4.7
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 34 4.7
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 6.2
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 33 6.2
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 33 6.2
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 33 8.2
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 152 bits (368), Expect = 1e-35
Identities = 72/84 (85%), Positives = 75/84 (89%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENPADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPRLL+V DP
Sbjct: 69 ENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPR 128
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQP+TEASYVN+P IALCNTDS
Sbjct: 129 ADHQPLTEASYVNLPTIALCNTDS 152
Score = 111 bits (267), Expect = 2e-23
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PLR+VDIAIPCN K +HS+GLMWW+LAREVLR+RG + R+ W+V+ +L+FYRDPEE EK
Sbjct: 153 PLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
Query: 687 DEQQAKEQ 710
+EQ A E+
Sbjct: 213 EEQAAAEK 220
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++INL+RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEK 57
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 144 bits (348), Expect = 3e-33
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENPADV V++++PFGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPRLLIV D
Sbjct: 69 ENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDAR 128
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQPITEA+YVNIPVIA CNT+S
Sbjct: 129 SDHQPITEAAYVNIPVIAFCNTNS 152
Score = 103 bits (246), Expect = 7e-21
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +3
Query: 489 FVQHRLPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRD 668
F PLR++D+AIPCN +S+GLMWWLL REVLRLRG + R+ W+V+ +LFFYRD
Sbjct: 147 FCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMPDLFFYRD 206
Query: 669 PEESEKDEQQAKE 707
PEE EK+EQ E
Sbjct: 207 PEEVEKEEQAKAE 219
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +IN+R+TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEK 57
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 137 bits (331), Expect = 3e-31
Identities = 67/84 (79%), Positives = 71/84 (84%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
EN ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR 208
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQP+ EASYVN+P IALCNTDS
Sbjct: 209 VDHQPLMEASYVNLPTIALCNTDS 232
Score = 92.3 bits (219), Expect = 1e-17
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PL +VDIAIPCN K +HS+G+MWW+L EV R+ G + R+ W+V+ + FYRDPEE EK
Sbjct: 233 PLCYVDIAIPCNNKGAHSVGVMWWMLVPEVRRISGTISREHPWEVMTDPCFYRDPEEIEK 292
Query: 687 DEQQAKEQ 710
++Q A E+
Sbjct: 293 EKQAAAEK 300
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 38 QISATMSGGLDVLALNEEDVTKMLAATTH 124
Q + TM G DVL +NEEDV K LAA TH
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 132 bits (319), Expect = 1e-29
Identities = 65/101 (64%), Positives = 77/101 (76%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENPADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL++V DP
Sbjct: 71 ENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPR 130
Query: 436 QDHQPITEASYVNIPVIALCNTDSH*DLWTLLSHATPSLPT 558
D Q I EAS+VNIPVIALC+TDS +L+H ++PT
Sbjct: 131 ADAQAIKEASFVNIPVIALCDTDS------ILNHVDIAIPT 165
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +3
Query: 510 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKD 689
L VDIAIP N K SIGL+W+LLAREVLR+RG L R WDV+ +L+FYRDPEE E++
Sbjct: 156 LNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDLYFYRDPEEVERE 215
Query: 690 EQQAK 704
E+ K
Sbjct: 216 EEAKK 220
Score = 67.3 bits (157), Expect = 4e-10
Identities = 25/55 (45%), Positives = 42/55 (76%)
Frame = +2
Query: 59 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEK 59
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 130 bits (314), Expect = 4e-29
Identities = 63/83 (75%), Positives = 68/83 (81%)
Frame = +1
Query: 259 NPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 438
NP DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 439 DHQPITEASYVNIPVIALCNTDS 507
D Q I EASYVNIPVIAL + DS
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDS 151
Score = 89.8 bits (213), Expect = 7e-17
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL-PRDQRWDVVVELFFYRDPEESE 683
P FVD+AIPCN + HSIGL+W+LLAREVLRLRG L R Q W ++ +L+FYRDPEE E
Sbjct: 152 PSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVE 211
Query: 684 KDEQQAKE 707
+Q A+E
Sbjct: 212 --QQVAEE 217
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = +2
Query: 80 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
L ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEK 56
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 124 bits (299), Expect = 3e-27
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENPADV +I +P QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP
Sbjct: 69 ENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPK 128
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQP+ E S VNIPVI CNTDS
Sbjct: 129 GDHQPVREGSAVNIPVIGFCNTDS 152
Score = 75.8 bits (178), Expect = 1e-12
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEK 57
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRD--PEES 680
PL+ VDI IPCN +SI LM W+LAREV R+ G+ PR Q DV+++LF R+ E
Sbjct: 153 PLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLFLMREHVDEPP 211
Query: 681 EKDEQQAKE 707
E E +A+E
Sbjct: 212 EGPEGEAQE 220
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 124 bits (299), Expect = 3e-27
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 73 ENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPR 132
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQPI E + NIP+IA C+TDS
Sbjct: 133 TDHQPIKEGALGNIPIIAFCDTDS 156
Score = 92.7 bits (220), Expect = 1e-17
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESE- 683
P+RFVDI IP N K HSIG ++WLLAR VL++RG + Q+WDV+V+LFFYR+PEE++
Sbjct: 157 PMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKP 216
Query: 684 KDEQQAKEQ 710
+DE +A Q
Sbjct: 217 EDEDEAGPQ 225
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2
Query: 74 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEK 61
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 116 bits (280), Expect = 5e-25
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENP DV ++RP+GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP
Sbjct: 92 ENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPR 151
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
D QPI+E ++VNIP IA C+TDS
Sbjct: 152 TDAQPISETAFVNIPTIAFCDTDS 175
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PL+ VDIAIP N K+ SIG +++LLAR VL++RG + WDV+V+LFFYRDPEE E
Sbjct: 176 PLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYRDPEELEA 235
Query: 687 DEQQAKE 707
EQ+ +E
Sbjct: 236 KEQEEEE 242
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +2
Query: 74 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDK 80
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 109 bits (262), Expect = 8e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +1
Query: 259 NPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 438
NP +V V+S+RP+G RAVLKF+ + G+ PIAGR+ PG TNQI F EPRLL+ DP
Sbjct: 70 NPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRT 129
Query: 439 DHQPITEASYVNIPVIALCNTDS 507
D Q + E+SYV++PVIALC+TDS
Sbjct: 130 DAQSLRESSYVSLPVIALCDTDS 152
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/64 (59%), Positives = 47/64 (73%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PL +VDIAIPCN K SI LM+WLLAREVL LR L R WDV+V+ FF+RDPE+ E+
Sbjct: 153 PLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWRDPEQFEQ 212
Query: 687 DEQQ 698
++
Sbjct: 213 KPEE 216
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
M+ L +E+ + ML A H+G +NV +M YVY R +G H+INL T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEK 57
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 107 bits (257), Expect = 3e-22
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
S+E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+IV D
Sbjct: 78 SNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSD 137
Query: 430 PAQDHQPITEASYVNIPVIALCNTDS 507
P+ DHQ + E+ Y+N+P I N+D+
Sbjct: 138 PSVDHQALRESGYINVPTIGFWNSDN 163
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 68 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
D+L + ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEK 66
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 106 bits (255), Expect = 6e-22
Identities = 48/77 (62%), Positives = 59/77 (76%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 70 ENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPR 129
Query: 436 QDHQPITEASYVNIPVI 486
DHQPI E++ P++
Sbjct: 130 TDHQPIKESALETSPLL 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +3
Query: 603 LRGVLPRDQRWDVVVELFFYRDPEESEKDEQQ 698
+RG + +WDV+V+LFFYRDPEE+++ E++
Sbjct: 161 MRGTILPGHKWDVMVDLFFYRDPEEAKEQEEE 192
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 106 bits (254), Expect = 7e-22
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENP DV V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP
Sbjct: 89 ENPQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPR 148
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
D Q EAS VNIPVIA C+TD+
Sbjct: 149 TDQQAFREASLVNIPVIAFCDTDA 172
Score = 98.7 bits (235), Expect = 1e-19
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PL FVDIAIPCN + +SI +M+WLLAREVLRLRG +PR WDV V+LFFYRDPEE+ K
Sbjct: 173 PLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWDVKVDLFFYRDPEEALK 232
Query: 687 DEQ 695
E+
Sbjct: 233 HEE 235
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 92 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEK 77
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 103 bits (247), Expect = 5e-21
Identities = 46/85 (54%), Positives = 63/85 (74%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
++PA++ V+++RP QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 74 DDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPV 133
Query: 436 QDHQPITEASYVNIPVIALCNTDSH 510
D Q I EASYVNIP I+LCN+D++
Sbjct: 134 VDRQAILEASYVNIPTISLCNSDAN 158
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +3
Query: 510 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKD 689
L+F+D+AIPCN K+ SIGL++WLLAREVLRL+G + R + WDV +LF PEE +
Sbjct: 159 LKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKPDLFVAL-PEEIPDE 217
Query: 690 EQ 695
E+
Sbjct: 218 EE 219
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +2
Query: 80 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAK 62
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 101 bits (241), Expect = 3e-20
Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRLLIV 423
E P DV V+SSRP GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+LLIV
Sbjct: 94 EQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIV 153
Query: 424 LDPAQDHQPITEASYVNIPVIALCNTDS 507
DP D Q I EASYVNIPVIAL N+D+
Sbjct: 154 TDPHLDRQAIVEASYVNIPVIALTNSDT 181
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
PL++VDI IP + + SI +++WLLAREV LRG L +D+ WDV+V+LF++++ +
Sbjct: 182 PLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGELNKDEEWDVLVDLFYHKEITNDQL 241
Query: 687 --DEQQAKEQXXXXXXXXXXXXXHEDW 761
+ Q K++ +DW
Sbjct: 242 GITDNQVKQEAEDHEQQAEGEKAEKDW 268
Score = 49.2 bits (112), Expect = 1e-04
Identities = 16/51 (31%), Positives = 35/51 (68%)
Frame = +2
Query: 68 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 220
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQ 81
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 99.5 bits (237), Expect = 8e-20
Identities = 49/87 (56%), Positives = 57/87 (65%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
E P DV IS++ FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 67 EEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPN 126
Query: 436 QDHQPITEASYVNIPVIALCNTDSH*D 516
D Q + EA+Y NIP IALC+TD+H D
Sbjct: 127 TDSQAVHEAAYANIPCIALCDTDAHLD 153
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/59 (59%), Positives = 43/59 (72%)
Frame = +3
Query: 510 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
L +VD IPCNTK+ +S+GL+ WLL REVLRLRG L R Q W V+ +LFFYRD + K
Sbjct: 152 LDYVDCVIPCNTKNKNSMGLVMWLLTREVLRLRGALTRTQEWSVLPDLFFYRDAADEAK 210
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEK 55
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = +1
Query: 295 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 474
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 475 IPVIALCNTDS 507
IP IA C+ DS
Sbjct: 93 IPTIAFCDIDS 103
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFF 659
P+R+VDI I N K H+IG ++WLL VL +R + +WDV+V+LFF
Sbjct: 104 PMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIALGHKWDVMVDLFF 154
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 89.8 bits (213), Expect = 7e-17
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEK 686
P+R+VDI IP N K +SIG ++WLLAR VL++RG + +WDV+V+LFFYRDPEE+++
Sbjct: 75 PMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKE 134
Query: 687 DEQQAKEQ 710
E++A Q
Sbjct: 135 QEEEAPAQ 142
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDS
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDS 74
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 88.6 bits (210), Expect = 2e-16
Identities = 36/48 (75%), Positives = 45/48 (93%)
Frame = +3
Query: 564 GLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKDEQQAKE 707
GL+WWLLAREVLRLRG++PR+ +W+VVV+LFFYRDPEE+EK+EQ KE
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRDPEEAEKEEQAQKE 48
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 87.8 bits (208), Expect = 3e-16
Identities = 33/52 (63%), Positives = 48/52 (92%)
Frame = +3
Query: 555 HSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKDEQQAKEQ 710
HSIGLMWW+L+REVLRLRG + RD W+++V+L+F+RDPEE+EK+EQ+A+++
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDPEEAEKEEQEARDR 99
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGT-HVINL 205
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 87.4 bits (207), Expect = 4e-16
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
++P++V VISSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP
Sbjct: 50 KHPSEVGVISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPR 109
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DH + EA YVN+ IAL N+ S
Sbjct: 110 ADHPFLMEAPYVNLLTIALRNSQS 133
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 104 MLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
+L A THLG N +F+M +YKR +G ++NL R++EK
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEK 38
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 611
PL + IAIP ++K +H++G WLLA VL G
Sbjct: 134 PLHCMGIAIPHDSKGAHTVGRRKWLLAWGVLHACG 168
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 86.6 bits (205), Expect = 6e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
++P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV D
Sbjct: 74 KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTY 133
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
D Q I E+ Y N+P IA NTD+
Sbjct: 134 ADKQAILESQYCNLPTIAFVNTDN 157
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 68 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVY-KRRADGTHVINLRRTWEK 223
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEK 62
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 468 CQHSCDCFVQHRLPLRFVDIAIPCNTKSSHSIGLMWWLLAREV--LRLRGVLPRDQRWDV 641
C FV L VDIAIP N +S +I +++L+R + ++ L RD +
Sbjct: 145 CNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTGAELVRDMK--- 201
Query: 642 VVELFFYRDPEESEK 686
VELF +RD E E+
Sbjct: 202 EVELFLFRDSVELEQ 216
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
S E+P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ D
Sbjct: 60 SIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISD 119
Query: 430 PAQDHQPITEASYVNIPVIALCNTDS 507
P D Q + EASYVNIPVI++CNTDS
Sbjct: 120 PLLDKQALLEASYVNIPVISVCNTDS 145
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 510 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELF 656
L ++DIAIP N K +S L+ WLL +++L +G L ++ W+V VE F
Sbjct: 147 LSYIDIAIPGNNKDRYSFALIIWLLTKKILIFKGELTKNCEWNVSVESF 195
Score = 46.4 bits (105), Expect = 8e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 83 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
NE D+ K+L H+G M+ YV+K+R+DG ++IN+ +T +K
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQK 50
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 84.6 bits (200), Expect = 3e-15
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = +3
Query: 546 KSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKDEQQAKEQ 710
K +HS+GL+WW+LAREVLR+RG + R+ W+V+ +L+FYRDPEE EK+EQ A E+
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 55
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
S +P D+ V++SRP+ R V KFA G+ + GR PG FTN + + EP++L+V D
Sbjct: 90 SRYDPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSD 149
Query: 430 PAQDHQPITEASYVNIPVIALCNTDSH*DLWTLL 531
P D Q I EA+ V IP++A +TD+ D L+
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLI 183
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYR 665
++D+ IP N K S+ L++W LAR++LR R V+P D V V F R
Sbjct: 179 YIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVPVSEFEMR 228
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +2
Query: 95 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
V L+A H+G + ME++VY+ RA+G +V+++R+ E+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDER 81
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
SH +PA + V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV D
Sbjct: 91 SHYDPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTD 150
Query: 430 PAQDHQPITEASYVNIPVIALCNTDS 507
PA D Q + EAS + +PV+ALC+T++
Sbjct: 151 PAGDAQVLKEASSIGVPVVALCDTNN 176
Score = 38.3 bits (85), Expect = 0.22
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 519 VDIAIPCNTKSSHSIGLMWWLLAREVLRL 605
VD+ IP N K ++ L++WLLAREV RL
Sbjct: 181 VDLVIPTNNKGRKALSLVYWLLAREVSRL 209
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 95 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
+ + LAA H+G + M +VY+ R DG +V++++ T E+
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDER 82
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = +1
Query: 259 NPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 438
+P+ V+S R +G R V KF G P+ GR PG FTN + F E L++V DP
Sbjct: 71 DPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRV 130
Query: 439 DHQPITEASYVNIPVIALCNTDS 507
D Q + EA + IPVIALC+TDS
Sbjct: 131 DEQAVVEAGTMGIPVIALCDTDS 153
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 507 PLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 620
P+ VD+ IP N + ++ L++WLLAREVLR+RG +P
Sbjct: 154 PISNVDLIIPTNNRGRKALALIFWLLAREVLRIRGDIP 191
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 262 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 441
P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP D
Sbjct: 64 PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLAD 123
Query: 442 HQPITEASYVNIPVIALCNTDSH*DLWTLL 531
Q + EA + IP+IALC+ ++ D L+
Sbjct: 124 VQAMKEAVKIGIPIIALCDANNKTDFVDLI 153
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELF 656
FVD+ IP N K S+ +++WLLARE+L+ RG + ++ ++ F
Sbjct: 149 FVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 76.2 bits (179), Expect = 9e-13
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
+NPA++ V+SSR + AVL FA TGA IA RFTPG+ TN + F+E R++IV+DP
Sbjct: 42 KNPAEIPVVSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDPH 101
Query: 436 QDHQPITEASYVNIPV 483
HQ + +A +V+I +
Sbjct: 102 VSHQAMHKALFVDIAI 117
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESE 683
FVDIAIP N + HS+ ++W LL R VLRL+G ++ +FFY DPE++E
Sbjct: 112 FVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG-----GDLSMMPGMFFYHDPEKAE 162
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 75.4 bits (177), Expect = 2e-12
Identities = 41/68 (60%), Positives = 46/68 (67%)
Frame = -3
Query: 225 SFSQVRRKLITWVPSARRL*T*VSIWKLTFSAPRWVVAASILVTSSSLRASTSNPPDIVA 46
SFSQV +L PSARRL T SIWKLTFS PRWVVA +ILV SSSLR S PPD++
Sbjct: 20 SFSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLT 79
Query: 45 LI*VTTKR 22
+ T R
Sbjct: 80 WKELRTSR 87
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 71.7 bits (168), Expect = 2e-11
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +3
Query: 573 WWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKDEQQAKEQ 710
WW+LAREVLR+RG + R+ W+V+ +L+FYRDPEE EK+EQ A E+
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 46
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 71.7 bits (168), Expect = 2e-11
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 262 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 441
P D+ +S R + + +F +TG +AGRF PG TN F EP ++ + DP D
Sbjct: 65 PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVD 124
Query: 442 HQPITEASYVNIPVIALCNTD 504
Q + EA+ + +P++ LC+T+
Sbjct: 125 RQALKEATEIGVPIVGLCDTE 145
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELF 656
F+D+ IP N K ++ L+++LL RE L+ RGV+ D + E F
Sbjct: 150 FIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVITDDTKLPFTYEEF 196
Score = 37.1 bits (82), Expect = 0.50
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 107 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
LA+ H+G + ME ++Y+ R+DG +V+++R+T E+
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDER 52
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 346 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDN 56
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +3
Query: 510 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV---LPRDQRWDVVVELFFYRDPEES 680
L++VD AIPCN ++++SI ++W+LL + VL ++ R+ V VEL + ++
Sbjct: 58 LKYVDCAIPCNNRNNYSIAMIWYLLTKAVLEIKKEEEGFERNPSAYVNVEL---ENKKKG 114
Query: 681 EKDEQQAKEQ 710
+KD+++ K++
Sbjct: 115 KKDKEKNKDK 124
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 69.3 bits (162), Expect = 1e-10
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
S+ P + SSR +G+ KFA GA GRF PG TN + EP +++V D
Sbjct: 133 SNYEPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTD 192
Query: 430 PAQDHQPITEASYVNIPVIALC---NTDSH*DL 519
P D Q + EA V IPVIA+C NT S+ DL
Sbjct: 193 PIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDL 225
Score = 36.3 bits (80), Expect = 0.88
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 519 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 620
VD+ +P N K ++ +++WLLA E L RG P
Sbjct: 223 VDLVVPTNNKGRKALSVVYWLLANETLDRRGAEP 256
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = +1
Query: 262 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 441
P+ V V S++P+ + + F G P+ GR PG TN + LL+V DP D
Sbjct: 75 PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTD 134
Query: 442 HQPITEASYVNIPVIALCNTDS 507
Q I EAS IPVIAL +TDS
Sbjct: 135 FQAINEASLTGIPVIALVDTDS 156
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELF 656
F+D+ IPCN K +S+ L++WLLAR+VLR RG L ++ V E F
Sbjct: 160 FIDLMIPCNNKGRNSLALVFWLLARQVLRERGELKPNEDLPVSWEEF 206
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +1
Query: 253 HENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 432
H +++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 65 HTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDP 124
Query: 433 AQDHQPITEASYVNIPVIALCNTDS 507
D Q +TEA+ IPVI + N+D+
Sbjct: 125 QVDAQAVTEATNAGIPVIGIANSDN 149
Score = 39.9 bits (89), Expect = 0.072
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 519 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESE 683
+D+ IP N + ++ ++WLLAREVL +RG + + ++ F +D E E
Sbjct: 154 LDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKYEIDDFETKDVREDE 208
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +1
Query: 310 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 444
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 154
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 250 SHENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 429
S+ P ++ V+ R + KF+ T GR+ PG TN + EP ++++ D
Sbjct: 58 SYYEPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITD 117
Query: 430 PAQDHQPITEASYVNIPVIALCNTD 504
P D + +A I ++ALC+T+
Sbjct: 118 PIMDKNALHDAYESGITILALCDTN 142
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 516 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELF 656
++D IP N + S S+ L++W+LARE LR RGV+ +D++ V VE F
Sbjct: 147 YIDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQLKVPVEEF 193
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 277 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 456
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 68 IIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIR 127
Query: 457 EASYVNIPVIALCNTDSH*DL--WTLLSHATPSLPTLLV 567
E S +NIP+I +CNTD++ W L S+ ++
Sbjct: 128 ELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMI 166
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/77 (42%), Positives = 41/77 (53%)
Frame = +1
Query: 277 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 456
V SSR GQ+AVL FAA G+ P +GRFTPG T+Q+ QP
Sbjct: 48 VTSSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSL 88
Query: 457 EASYVNIPVIALCNTDS 507
+ YVN+P IAL + DS
Sbjct: 89 ASQYVNLPPIALYDADS 105
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +3
Query: 522 DIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYRDPEESEKDEQQA 701
DIA PCN K HS+GLM W+LA E L + W +++FYRDPE+ ++ + A
Sbjct: 111 DIA-PCNIKGVHSVGLMCWVLAGEALSFLNT--HEWSWP---DVYFYRDPEKIKEGQAAA 164
Query: 702 KE 707
++
Sbjct: 165 EK 166
Score = 34.7 bits (76), Expect = 2.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 122 HLGAENVNFQMETYVYKRRADGTHVIN 202
HL N + Q++ YVYK++ DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +1
Query: 331 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 468
TGA P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DL 519
F +++ R P LLIV DP + + EA+ + IPV+ALCNT+++ +L
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPEL 210
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWTL 528
P +L++ DP ++ +TEA + IPVIALCNT+S ++ TL
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITL 241
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 42.3 bits (95), Expect = 0.013
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 633 WDVVVELFFYRDPEESEKDEQQAKEQ 710
W+V+ L+FYRDPEE+EK+EQ A E+
Sbjct: 108 WEVMSNLYFYRDPEETEKEEQAAAEK 133
Score = 41.9 bits (94), Expect = 0.018
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 310 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 471
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 472 NIPVIALC 495
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWTL 528
P LIV+DP D + EA +NIPVI LC+T+ D+ TL
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTL 200
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 40.3 bits (90), Expect = 0.054
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 388 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH 510
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D++
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTN 196
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 40.3 bits (90), Expect = 0.054
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +1
Query: 400 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWTLLSHATPSLPTLL 564
+ P L+I L+P Q+ PI EA +NIP+IAL ++++ L + +++ P T L
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIPGAQTSL 419
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 39.9 bits (89), Expect = 0.072
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
F I+ + P +LI++DP D I EA +NIPVIAL NT++
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNA 243
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 504
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTN 191
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 361 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 504
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 136
Score = 38.3 bits (85), Expect = 0.22
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 671 RVTVEEQFNHNIPALVTGKHTTKPQHFTCQQPPHQ 567
R++VE H++P + TG T Q+F Q PPHQ
Sbjct: 100 RISVEVGIRHDLPRVFTGNGATHAQNFLSQHPPHQ 134
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 38.3 bits (85), Expect = 0.22
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +1
Query: 292 PFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 447
P + AV F T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 7 PVSRAAVCCF---TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DL 519
P+++I+ DP + I EA + IPVIA+CNT+++ DL
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDL 300
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +1
Query: 403 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*D 516
+P LL+V+D ++H I EA +NIPV+A+ +T+S+ D
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPD 198
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 37.1 bits (82), Expect = 0.50
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DL 519
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS D+
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDV 195
>UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 334
Score = 36.3 bits (80), Expect = 0.88
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -1
Query: 443 WSCAGSNTIKRRGSRNAA*IWLVKAPGVKRPAIGVAPVCAANFSTAR*PKGRDEMTNTSA 264
WS GS ++R G ++ + + A G PVCA N + +R P R M + +
Sbjct: 119 WSAGGSVEVRRDGPGIEVILYSAEGDEIVSAASGFCPVCAVNIAASRVPSIRRRMASRKS 178
Query: 263 GFSWLRQHEQ 234
+ + ++E+
Sbjct: 179 RNTGMEKYER 188
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 400 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DL 519
R+P +L+V+D ++ + EA +NIP+++L +T+ DL
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDL 195
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 34.7 bits (76), Expect = 2.7
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
P + V+DP ++H ++EA+ + +PV+AL +T++
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNA 207
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 403 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWT 525
+P LL+VL+P ++ + EA +P IA+ +TDS L T
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVT 356
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 34.3 bits (75), Expect = 3.6
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 504
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTN 189
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 33.9 bits (74), Expect = 4.7
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 373 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*D 516
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ D
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPD 194
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 504
P LLIV+DP + + EA + IPV+AL +T+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTN 192
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 403 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWT 525
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLT 402
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 403 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSH*DLWT 525
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLT 412
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 379 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
N ++ R P ++ ++DP ++ + EA + I +AL +TDS
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDS 191
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 33.1 bits (72), Expect = 8.2
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 504
P ++ V+DP ++H + EA + IPV+A+ +T+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTN 194
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 33.1 bits (72), Expect = 8.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 394 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 507
+F P + I L +QPI EA+ N P+IA C+TDS
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDS 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,104,064
Number of Sequences: 1657284
Number of extensions: 18828944
Number of successful extensions: 48105
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 45769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48053
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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