Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00553
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.5  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 663 RDPEESEKDEQQAKEQXXXXXXXXXXXXXHEDWMK 767
           R+ +E  K +QQ K+Q             H D MK
Sbjct: 79  REEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMK 113


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 663 RDPEESEKDEQQAKEQXXXXXXXXXXXXXHEDWMK 767
           R+ +E  K +QQ K+Q             H D MK
Sbjct: 230 REEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMK 264


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 663 RDPEESEKDEQQAKEQXXXXXXXXXXXXXHEDWMK 767
           R+ +E  K +QQ K+Q             H D MK
Sbjct: 289 REEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMK 323


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 256 RGYDSTSSQNKFFPG 212
           + +DS S QN  FPG
Sbjct: 738 KSFDSRSRQNSSFPG 752


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 532  IAMSTNLSGSLCCTKQSQE 476
            I  ST L+  LCCTK+ +E
Sbjct: 1356 ILASTELN--LCCTKKKEE 1372


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 532  IAMSTNLSGSLCCTKQSQE 476
            I  ST L+  LCCTK+ +E
Sbjct: 1356 ILASTELN--LCCTKKKEE 1372


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 532  IAMSTNLSGSLCCTKQSQE 476
            I  ST L+  LCCTK+ +E
Sbjct: 1356 ILASTELN--LCCTKKKEE 1372


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 532  IAMSTNLSGSLCCTKQSQE 476
            I  ST L+  LCCTK+ +E
Sbjct: 1356 ILASTELN--LCCTKKKEE 1372


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 489 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 400
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,776
Number of Sequences: 336
Number of extensions: 4998
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)