Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00553
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 129 3e-30
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 5.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 5.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical ... 28 6.7
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.7
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 8.8
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 8.8
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 8.8
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 129 bits (311), Expect = 3e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 256 ENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 435
ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRLL++ DP
Sbjct: 69 ENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPR 128
Query: 436 QDHQPITEASYVNIPVIALCNTDS 507
DHQ +TEASYV +PVI+ NT+S
Sbjct: 129 IDHQAVTEASYVGVPVISFVNTES 152
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Frame = +3
Query: 489 FVQHRLPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVEL 653
FV PL+ +DI +PCN K SIGLMWW+LARE+L LRG + R + +++ +L
Sbjct: 147 FVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDL 206
Query: 654 FFYRDPEESEKDEQQA 701
+FYRDP E+EK+E A
Sbjct: 207 YFYRDPTETEKEETGA 222
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 53 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 223
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEK 57
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 298 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 459
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CVRHLITALRSACCTEVCRAHR-CYAYCG 353
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CVRHLITALRSACCTEVCRAHR-CYAYCG 353
C R T R+ CCT C R C CG
Sbjct: 94 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CVRHLITALRSACCTEVCRAHR-CYAYCG 353
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CVRHLITALRSACCTEVCRAHR-CYAYCG 353
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CVRHLITALRSACCTEVCRAHR-CYAYCG 353
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical
protein Y39G8B.10 protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 172 TTC*WYPCDQLASYLGKTCSGCSCCRSHEN 261
T C +Y C+Q Y KTC C+ ++ EN
Sbjct: 38 TNC-FYTCEQREQYCAKTCEYCAGQKTCEN 66
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 278 SSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHKTI 445
S+HH V +L S P L++ + + + + R K H +N S Y TL T+
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVSTV 155
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 359 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLC--ATQTPTKICGH 526
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC A P ++ H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAHPLQVFYH 3395
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 359 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLC--ATQTPTKICGH 526
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC A P ++ H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAHPLQVFYH 3406
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 359 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLC--ATQTPTKICGH 526
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC A P ++ H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAHPLQVFYH 3406
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 359 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLC--ATQTPTKICGH 526
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC A P ++ H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAHPLQVFYH 3406
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 543 TKSSHSIGLMWWLLA 587
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,722,892
Number of Sequences: 27780
Number of extensions: 457564
Number of successful extensions: 1240
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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