Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00551
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7; Endoptery... 141 1e-32
UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n... 66 6e-10
UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4; Sophop... 60 4e-08
UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to nucleoplas... 56 8e-07
UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-... 54 3e-06
UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3; Ech... 46 0.001
UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria pectini... 38 0.30
UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.6
>UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7;
Endopterygota|Rep: Nucleoplasmin isoform 2 - Bombyx mori
(Silk moth)
Length = 187
Score = 141 bits (342), Expect = 1e-32
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL
Sbjct: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 60
Query: 234 QEAVKLP 254
QEAVKLP
Sbjct: 61 QEAVKLP 67
Score = 88.2 bits (209), Expect = 2e-16
Identities = 56/119 (47%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Frame = +2
Query: 245 KTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPVXXXXXXXXXXXXXXXXXXXXXXX 424
K +AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV
Sbjct: 65 KLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPVHLIGHHLLGALLEEFEDMEEMEE 124
Query: 425 XXXXXXXXXXSQFK----------------DEDNEEGEPKGKKAKCRIMPKAKLHRPRR 553
SQFK DEDNEEGEPKGKKAK K K P++
Sbjct: 125 EMLDEEEGDDSQFKEDENKRKGAGKRKPNEDEDNEEGEPKGKKAKMSNNAKGKAASPKK 183
>UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n=1;
Maconellicoccus hirsutus|Rep: Nucleoplasmin isoform
1-like protein - Maconellicoccus hirsutus (hibiscus
mealybug)
Length = 176
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAE-------YPRSNKLVIRQALLGPDAKPDELNVI 212
MT+++F+G+TL + S+ WDP+ K + Y + L+++QA+LGP+AK E+NV+
Sbjct: 1 MTEDYFWGLTLDKNKTSDLWDPDVKNDANDSTQGYRGEHTLLVKQAVLGPEAKDGEINVV 60
Query: 213 QVEAMSLQEAVKLP 254
+VEAM + VK P
Sbjct: 61 EVEAMGYKSDVKYP 74
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 245 KTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
K I VLK G LD+ FPD PVTF L++GSGP+
Sbjct: 72 KYPITVLKGGSQHQSLLDLLFPDPPVTFKLIKGSGPI 108
>UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4;
Sophophora|Rep: Nucleoplasmin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V +
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVN--TP 56
Query: 234 QEAVKLP 254
+++V++P
Sbjct: 57 KDSVQIP 63
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 59 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to
nucleoplasmin-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
nucleoplasmin-like protein - Nasonia vitripennis
Length = 141
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 245 KTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPVXXXXXXXXXXXXXXXXXXXXXXX 424
K IA+L++G++ + LD+ FPD PVTFTL++GSGPV
Sbjct: 28 KIPIALLEMGKTSQIILDLSFPDPPVTFTLIKGSGPVHIVGHNLLATHMDEFEDMEDEEV 87
Query: 425 XXXXXXXXXXSQF-KDEDNEEGEPKGKKAKCRIMPK 529
+ +DED E+ EPK KK K PK
Sbjct: 88 EVDNFDDDDDEKDPEDEDEEDDEPKKKKNKVGAPPK 123
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 168 ALLGPDAKPDELNVIQVEAMSLQEAVKLP 254
ALLGP+AK ELNV+QVEAM L+ +K+P
Sbjct: 2 ALLGPEAKAGELNVLQVEAMGLKGPIKIP 30
>UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-PA
- Drosophila melanogaster (Fruit fly)
Length = 156
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 236 RSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
++ K IAVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 68 KTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVE 221
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAE 58
>UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3;
Echinacea|Rep: Mitotic apparatus protein p62 -
Lytechinus pictus (Painted sea urchin)
Length = 411
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEA--------KAEYPRSNKLVIRQALLGPDAKPDELNV 209
M E+F+G TLS + WDPE+ E S+ L ++QA+LG +AK D+ NV
Sbjct: 1 MAKEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNV 60
Query: 210 IQVEAMS 230
I+VE ++
Sbjct: 61 IEVETIN 67
>UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria
pectinifera|Rep: Nucleolar protein - Asterina
pectinifera (Starfish)
Length = 346
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNK--------LVIRQALLGPDAKPDELNV 209
M+ EFF+G +L+ + + W+P E N L ++QA+LG AK E NV
Sbjct: 1 MSKEFFWGDSLTGTKKEVKWNPSLDDEDDFDNLDSDGIQHFLFLKQAVLGATAKEGERNV 60
Query: 210 IQVEAMSLQ-EAVKLP 254
+++E + + VK P
Sbjct: 61 VEIETENFDGDNVKQP 76
>UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 362
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 63 EFFYGVTLSSSHQSETWDPEAKAEYPR----SNKLVIRQALLGPDAKPDELNVIQVEAMS 230
E F+G LS S + TW+PE E +KLV+ QA LG +K ++++V +M
Sbjct: 7 EDFWGCVLSKSEDTVTWNPEFDGEDTLLGQIEHKLVLSQACLG--SKATGKSMVEVTSMD 64
Query: 231 LQ 236
+
Sbjct: 65 FK 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,830,976
Number of Sequences: 1657284
Number of extensions: 12215586
Number of successful extensions: 30391
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30373
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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