Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00551
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035809-1|AAH35809.2|  595|Homo sapiens sialic acid binding Ig-...    31   5.1  
AY358140-1|AAQ88507.1|  595|Homo sapiens SIGLECL1 protein.             31   5.1  
AF282256-1|AAK71521.1|  595|Homo sapiens Siglec-L1 protein.            31   5.1  
AF277806-2|AAK51233.1|  477|Homo sapiens sialic acid-binding imm...    31   5.1  
AF277806-1|AAK51234.1|  595|Homo sapiens sialic acid-binding imm...    31   5.1  
AY029765-1|AAK37403.1|  839|Homo sapiens zinc finger 1111 protein.     30   8.9  

>BC035809-1|AAH35809.2|  595|Homo sapiens sialic acid binding
           Ig-like lectin 12 protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 224 HVTTRSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 349
           H T+ + + T+    V  +R VRL+I +P   +T T+ QG G
Sbjct: 336 HGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDG 377


>AY358140-1|AAQ88507.1|  595|Homo sapiens SIGLECL1 protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 224 HVTTRSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 349
           H T+ + + T+    V  +R VRL+I +P   +T T+ QG G
Sbjct: 336 HGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDG 377


>AF282256-1|AAK71521.1|  595|Homo sapiens Siglec-L1 protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 224 HVTTRSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 349
           H T+ + + T+    V  +R VRL+I +P   +T T+ QG G
Sbjct: 336 HGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDG 377


>AF277806-2|AAK51233.1|  477|Homo sapiens sialic acid-binding
           immunoglobulin-like lectin-like short splice variant
           protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 224 HVTTRSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 349
           H T+ + + T+    V  +R VRL+I +P   +T T+ QG G
Sbjct: 218 HGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDG 259


>AF277806-1|AAK51234.1|  595|Homo sapiens sialic acid-binding
           immunoglobulin-like lectin-like long splice variant
           protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 224 HVTTRSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 349
           H T+ + + T+    V  +R VRL+I +P   +T T+ QG G
Sbjct: 336 HGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDG 377


>AY029765-1|AAK37403.1|  839|Homo sapiens zinc finger 1111 protein.
          Length = 839

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 149 QARHSSSIVRSRCQTR*IKCDTGGSHVTTRSSKTTIAVLKVGESRH 286
           Q  H +S  RS  + +  KC   G    TRS+ TT  V+  GE R+
Sbjct: 272 QNSHLASHQRSHTKEKPYKCYECGKAFRTRSNLTTHQVIHTGEKRY 317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,248,946
Number of Sequences: 237096
Number of extensions: 1993794
Number of successful extensions: 4150
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4150
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)