Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00551
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein p... 60 2e-09
U59498-1|AAC47295.1| 152|Drosophila melanogaster nucleoplasmin-... 60 2e-09
AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p pro... 60 2e-09
AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA... 60 2e-09
AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA... 54 2e-07
U59497-1|AAC47294.1| 121|Drosophila melanogaster nucleoplasmin-... 47 3e-05
AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p pro... 31 1.1
AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA... 31 2.0
AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-P... 29 6.0
>X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein
protein.
Length = 152
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V +
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVN--TP 56
Query: 234 QEAVKLP 254
+++V++P
Sbjct: 57 KDSVQIP 63
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 59 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>U59498-1|AAC47295.1| 152|Drosophila melanogaster
nucleoplasmin-like protein protein.
Length = 152
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V +
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVN--TP 56
Query: 234 QEAVKLP 254
+++V++P
Sbjct: 57 KDSVQIP 63
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 59 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p
protein.
Length = 152
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V +
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVN--TP 56
Query: 234 QEAVKLP 254
+++V++P
Sbjct: 57 KDSVQIP 63
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 59 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA
protein.
Length = 152
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 233
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V +
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVN--TP 56
Query: 234 QEAVKLP 254
+++V++P
Sbjct: 57 KDSVQIP 63
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 59 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA
protein.
Length = 156
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 236 RSSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
++ K IAVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 68 KTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVE 221
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAE 58
>U59497-1|AAC47294.1| 121|Drosophila melanogaster
nucleoplasmin-like protein-short protein.
Length = 121
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 239 SSKTTIAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 355
S + IAVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 28 SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 66
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +3
Query: 153 LVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLP 254
+VI+Q LLG +AK +E NV++V + +++V++P
Sbjct: 1 MVIKQILLGAEAKENEFNVVEVN--TPKDSVQIP 32
>AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p
protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 85 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 195
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 162 FHHHQQQQQQ-QQQQQQQHAAAAAAAALHAASQHPQQ 197
>AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA
protein.
Length = 713
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 85 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 195
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 633 FHHHQQQQ---QQQQQQQHAAAAAAAALHAASQHPQQ 666
>AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-PA
protein.
Length = 512
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 50 HHDGRVFLWCHPFIITSVRDMGSRGK 127
H GR F++C P SV MG RG+
Sbjct: 445 HLSGRRFVFCFPISTQSVAQMGRRGR 470
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,561,531
Number of Sequences: 53049
Number of extensions: 592676
Number of successful extensions: 1873
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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